RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 MYEF2Q9P2K5 600 aaKnown RBP16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 LYZL6O75951 148 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 ZNF92Q03936 586 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 GSG1Q2KHT4 349 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 OR10K2Q6IF99 312 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 MTFR2Q6P444 385 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 CCBE1Q6UXH8 406 aaPredicted RBP16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 CD163Q86VB7 1156 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 RPRMLQ8N4K4 120 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 SEMA6DQ8NFY4 1073 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 SSC4DQ8WTU2 575 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 PP6455Q8WZ26 134 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 YIPF5Q969M3 257 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 MS4A3Q96HJ5 214 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 POM121L2Q96KW2 1035 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 NEDD4LQ96PU5 975 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 CTDSPLO15194 276 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 RAD51DO75771 328 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 CD3GP09693 182 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 GABRA1P14867 456 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 MDP1Q86V88 176 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 CISD2Q8N5K1 135 aaKnown RBP16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 SNRNP27Q8WVK2 155 aaKnown RBP16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 C10orf35Q96D05 121 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 RGCCQ9H4X1 137 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 NCOR2Q9Y618 2525 aa16.3■□□□□ 0.2
CHRNA4-203ENST00000467563 DHRS7CA6NNS2 312 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 WDR1O75083 606 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 KDM4BO94953 1096 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 CNOT4O95628 575 aaKnown RBP16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 HCKP08631 526 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 PTHLHP12272 177 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 PER3P56645 1201 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 TAS2R20P59543 309 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 FAM3AP98173 230 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 TGFBR3Q03167 851 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 PLP2Q04941 152 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 UTS2BQ765I0 119 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 DPPA2Q7Z7J5 298 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 STARD4Q96DR4 205 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 ZNF75AQ96N20 296 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 AUNIPQ9H7T9 357 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 PLSCR4Q9NRQ2 329 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 ZNF391Q9UJN7 358 aa16.29■□□□□ 0.2
CHRNA4-203ENST00000467563 hCG_38984A0A1B0GV85 526 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 CIB4A0PJX0 185 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 XRCC3O43542 346 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 ALDOBP05062 364 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 GSK3AP49840 483 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 TDGF1P3P51864 188 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 SF3B4Q15427 424 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 TSC22D1Q15714 1073 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 ZNF57Q68EA5 555 aaPredicted RBP16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 CRIP3Q6Q6R5 217 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 NPRL2Q8WTW4 380 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 SMIM4Q8WVI0 70 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 NANOS1Q8WY41 292 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 SPSB4Q96A44 273 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 RABL2AQ9UBK7 228 aaPredicted RBP16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 RABL2BQ9UNT1 228 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 DSPP15924 2871 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 GSTZ1O43708 216 aaPredicted RBP16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 CGAP01215 116 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 PRF1P14222 555 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 MNDAP41218 407 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 INPP1P49441 399 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 RIPPLY1Q0D2K3 151 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 GABRA6Q16445 453 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 LINC00303Q3SY05 128 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 C1orf185Q5T7R7 199 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 C3P1Q6ZMU1 363 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 ANGPTL5Q86XS5 388 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 CDH26Q8IXH8 852 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 GABRG1Q8N1C3 465 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 NAXEQ8NCW5 288 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 SLC22A4Q9H015 551 aa16.28■□□□□ 0.2
CHRNA4-203ENST00000467563 A0A1W2PR80 420 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 FUOMA2VDF0 154 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 GGT3PA6NGU5 568 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 FIGNL2A6NMB9 653 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 XRCC2O43543 280 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 ALX3O95076 343 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 COX5AP20674 150 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 MAP2K3P46734 347 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 OR3A4PP47883 348 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 SRP9P49458 86 aaKnown RBP16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 QRFPP83859 136 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 PAQR4Q8N4S7 273 aaPredicted RBP16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 FAM57AQ8TBR7 257 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 GAL3ST1Q99999 423 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 ATG5Q9H1Y0 275 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 TBCCD1Q9NVR7 557 aa16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 INTS1Q8N201 2190 aaKnown RBP16.27■□□□□ 0.2
CHRNA4-203ENST00000467563 ZZEF1O43149 2961 aa16.27■□□□□ 0.19
CHRNA4-203ENST00000467563 LYRM1O43325 122 aa16.26■□□□□ 0.19
CHRNA4-203ENST00000467563 PTGER4P35408 488 aa16.26■□□□□ 0.19
CHRNA4-203ENST00000467563 UNC119Q13432 240 aa16.26■□□□□ 0.19
CHRNA4-203ENST00000467563 OR8B8Q15620 311 aa16.26■□□□□ 0.19
CHRNA4-203ENST00000467563 AWAT2Q6E213 333 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms