RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ZNF180Q9UJW8 692 aa9.82□□□□□ -0.84
UBR4-210ENST00000466969 PPP2R2CQ9Y2T4 447 aa9.82□□□□□ -0.84
UBR4-210ENST00000466969 TMEM233B4DJY2 109 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 C12orf77C9JDV5 145 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 KPNA4O00629 521 aaPredicted RBP9.81□□□□□ -0.84
UBR4-210ENST00000466969 SCG5P05408 212 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 OR8U8P0C7N1 319 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 FASP25445 335 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 BRS3P32247 399 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 DSTNP60981 165 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 IL18R1Q13478 541 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 TTC33Q6PID6 262 aaPredicted RBP9.81□□□□□ -0.84
UBR4-210ENST00000466969 BLOC1S3Q6QNY0 202 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 MRPL21Q7Z2W9 205 aaKnown RBP9.81□□□□□ -0.84
UBR4-210ENST00000466969 TMEM185AQ8NFB2 350 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 NDNFQ8TB73 568 aa9.81□□□□□ -0.84
UBR4-210ENST00000466969 PKD1P98161 4303 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 CD300LBA8K4G0 201 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 TFF1P04155 84 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 ACAA1P09110 424 aaPredicted RBP9.8□□□□□ -0.84
UBR4-210ENST00000466969 IGHV1-8P0DP01 117 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 GABRA2P47869 451 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 CAPZA1P52907 286 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 MVDP53602 400 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 RGS8P57771 180 aaPredicted RBP9.8□□□□□ -0.84
UBR4-210ENST00000466969 SNAPC1Q16533 368 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 CCDC92Q53HC0 331 aaPredicted RBP9.8□□□□□ -0.84
UBR4-210ENST00000466969 MINOS1Q5TGZ0 78 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 C8orf74Q6P047 294 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 WDR82Q6UXN9 313 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 DPY19L4Q7Z388 723 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 C4orf3Q8WVX3 66 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 FAM46AQ96IP4 442 aaKnown RBP9.8□□□□□ -0.84
UBR4-210ENST00000466969 BTNL2Q9UIR0 455 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 MINOS1-NBL1R4GNA1 71 aa9.8□□□□□ -0.84
UBR4-210ENST00000466969 PRSS29PA6NIE9 313 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 BHLHE40O14503 412 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 OVOL1O14753 267 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 FGF4P08620 206 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 CCL3L1P16619 93 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 TCP1P17987 556 aaKnown RBP9.79□□□□□ -0.84
UBR4-210ENST00000466969 AQP2P41181 271 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 ARHGDIBP52566 201 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 CTXN1P60606 82 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 RPL31P62899 125 aaKnown RBP9.79□□□□□ -0.84
UBR4-210ENST00000466969 TOP3AQ13472 1001 aaPredicted RBP9.79□□□□□ -0.84
UBR4-210ENST00000466969 ACSM6Q6P461 480 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 C11orf53Q8IXP5 236 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 ZNRF1Q8ND25 227 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 OR11H6Q8NGC7 330 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 OR8S1Q8NH09 359 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 LRRC8CQ8TDW0 803 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 TSEN15Q8WW01 171 aaKnown RBP9.79□□□□□ -0.84
UBR4-210ENST00000466969 TMED9Q9BVK6 235 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 ADA2Q9NZK5 511 aa9.79□□□□□ -0.84
UBR4-210ENST00000466969 GGT3PA6NGU5 568 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 AP4M1O00189 453 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 CHP2O43745 196 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 S100A3P33764 101 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 EMX2Q04743 252 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 PNLIPRP3Q17RR3 467 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 DPY19L1Q2PZI1 675 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 SPANXN4Q5MJ08 99 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 TMEM200BQ69YZ2 307 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 LINC00114Q6XXX2 140 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 TIFABQ6ZNK6 161 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 ZNF575Q86XF7 245 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 FOXRED2Q8IWF2 684 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 Q8N1X5 172 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 SLC35F6Q8N357 371 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 ANGPTL6Q8NI99 470 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 TESCQ96BS2 214 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 RAB3IPQ96QF0 476 aaPredicted RBP9.78□□□□□ -0.84
UBR4-210ENST00000466969 THUMPD1Q9NXG2 353 aaKnown RBP9.78□□□□□ -0.84
UBR4-210ENST00000466969 DCDC2Q9UHG0 476 aa9.78□□□□□ -0.84
UBR4-210ENST00000466969 NPIPB13A6NJU9 1138 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 NPIPB4C9JG80 1138 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 RER1O15258 196 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 HSPA12AO43301 675 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 SPARCP09486 303 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 RBMY1A1P0DJD3 496 aaKnown RBP9.77□□□□□ -0.85
UBR4-210ENST00000466969 CDKN2CP42773 168 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 CSNK2BP67870 215 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 PRR20EP86478 221 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 PRR20CP86479 221 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 PRR20DP86480 221 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 PRR20BP86481 221 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 PRR20AP86496 221 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 MPP2Q14168 576 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 GPR139Q6DWJ6 353 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 TSEN54Q7Z6J9 526 aaKnown RBP9.77□□□□□ -0.85
UBR4-210ENST00000466969 STPG2Q8N412 459 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 CCDC63Q8NA47 563 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 OR1M1Q8NGA1 313 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 AGR3Q8TD06 166 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 DCUN1D4Q92564 292 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 COQ7Q99807 217 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 BCL2L10Q9HD36 194 aa9.77□□□□□ -0.85
UBR4-210ENST00000466969 PAPOLBQ9NRJ5 636 aaKnown RBP9.77□□□□□ -0.85
UBR4-210ENST00000466969 NINJ2Q9NZG7 142 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms