RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 GMEB1Q9Y692 573 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 V9GYY9 64 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 AQRO60306 1485 aaKnown RBP eCLIP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CAMTA1Q9Y6Y1 1673 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 DOCK9Q9BZ29 2069 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 IGHV3-74A0A0B4J1X5 117 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 GOLGA8QA0A0J9YX86 632 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 KIR2DS1A0A191URI9 304 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 ERICH2A1L162 156 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 PLAC8L1A1L4L8 177 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 MGAT4DA6NG13 374 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 SEC14L6B5MCN3 397 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 INS-IGF2F8WCM5 200 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 CD5LO43866 347 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 SS18L1O75177 396 aaPredicted RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 TRAPPC6AO75865 159 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 GABARAPO95166 117 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 SMC2O95347 1197 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 HLA-DPB1P04440 258 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 IGKV4-1P06312 121 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 CD3GP09693 182 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 RAB3AP20336 220 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 BGNP21810 368 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 OMGP23515 440 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 MYL9P24844 172 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 HCAR3P49019 387 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 P2RX1P51575 399 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 HCCSP53701 268 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 TAS2R39P59534 338 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 TAS2R60P59551 318 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 OR2B8PP59922 312 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 UBE2NP61088 152 aaKnown RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 RPS23P62266 143 aaKnown RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 DGCR6Q14129 220 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 KIR2DS1Q14954 304 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 USF2Q15853 346 aaPredicted RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 POU2AF1Q16633 256 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 C18orf21Q32NC0 220 aaPredicted RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 GCSAMLQ5JQS6 135 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 TMEM255AQ5JRV8 349 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 CPTPQ5TA50 214 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 METTL21CQ5VZV1 264 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 DUPD1Q68J44 220 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 OR2T5Q6IEZ7 315 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 DNAJC24Q6P3W2 148 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 ARL9Q6T311 187 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 FBXW12Q6X9E4 464 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 NCCRP1Q6ZVX7 275 aaPredicted RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 COPS6Q7L5N1 327 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 HMGN2P46Q86SG4 172 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 CDKL3Q8IVW4 592 aaPredicted RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC30A8Q8IWU4 369 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 PRSS58Q8IYP2 241 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 COX18Q8N8Q8 333 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 OR11H7Q8NGC8 314 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 OR10W1Q8NGF6 305 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 OR6N2Q8NGY6 317 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 OR2T29Q8NH02 315 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 TMEM234Q8WY98 164 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 RGP1Q92546 391 aaPredicted RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 MRGPRFQ96AM1 343 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 BTN2A3PQ96KV6 586 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 ACBD6Q9BR61 282 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 BBS2Q9BXC9 721 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 FRMD8P1Q9BZ68 369 aaPredicted RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 SLIRPQ9GZT3 109 aaKnown RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 SPNS1Q9H2V7 528 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 REEP1Q9H902 201 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 VCX3AQ9NNX9 186 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 MYOZ1Q9NP98 299 aaPredicted RBP1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 ISYNA1Q9NPH2 558 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 RGS18Q9NS28 235 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 CTSFQ9UBX1 484 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 GGA2Q9UJY4 613 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 CES1P1Q9UKY3 287 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 PSG8Q9UQ74 426 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 POFUT2Q9Y2G5 429 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 OR51B2Q9Y5P1 312 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 MAP3K19Q56UN5 1328 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 MAP3K15Q6ZN16 1313 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 JCADQ9P266 1359 aa1.29□□□□□ -2.2
GTF3C3-209ENST00000466862 GPR179Q6PRD1 2367 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 IGLV11-55A0A075B6I3 123 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 TRAV8-7A0A075B6U6 113 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 IGHV3OR16-9A0A0B4J2B5 98 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 A0A0B4J2E0 115 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 IGHV1-69DA0A0B4J2H0 117 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 A0A1B0GW15 77 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 TVP23AA6NH52 213 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 GOLGA8JA6NMD2 632 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 IQCF5A8MTL0 148 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 C11orf94C9JXX5 98 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 H7C2Y5 167 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CETN3O15182 167 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 RAD1O60671 282 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 CTNSO60931 367 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 ALOX12BO75342 701 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 SC5DO75845 299 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 TTC4O95801 387 aa1.28□□□□□ -2.2
GTF3C3-209ENST00000466862 PTTG1O95997 202 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms