RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ARMC7Q9H6L4 198 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLC38A10Q9HBR0 1119 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 C8orf17Q9NRJ1 99 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 RHBDL2Q9NX52 303 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 IFNKQ9P0W0 207 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 HES2Q9Y543 173 aa2.59□□□□□ -1.99
CDC42BPA-211ENST00000466538 IGHV7-4-1A0A0J9YVY3 117 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 M0QX08 132 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 RNF113AO15541 343 aaKnown RBP2.58□□□□□ -2
CDC42BPA-211ENST00000466538 CTNSO60931 367 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 FOXH1O75593 365 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 LCA5LO95447 670 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 CCNE2O96020 404 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 IGHV3-11P01762 117 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 MBP02144 154 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 HOXB8P17481 243 aaPredicted RBP2.58□□□□□ -2
CDC42BPA-211ENST00000466538 NPY1RP25929 384 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 GABRR2P28476 465 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 TAS2R31P59538 309 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 ATP6V0D1P61421 351 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 PSMC5P62195 406 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 IFITM3Q01628 133 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 STK38Q15208 465 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 ABCA11PQ4W5N1 156 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 YIF1BQ5BJH7 314 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 MLIPQ5VWP3 458 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 SAXO2Q658L1 398 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 SHISA6Q6ZSJ9 500 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 RAB43Q86YS6 212 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 DAW1Q8N136 415 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 LGI3Q8N145 548 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 GPR26Q8NDV2 337 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 TMEM104Q8NE00 496 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 FBXO36Q8NEA4 188 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 OR9A2Q8NGT5 310 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 ZNF461Q8TAF7 563 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 RXFP4Q8TDU9 374 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 C17orf50Q8WW18 174 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 TOP1MTQ969P6 601 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 RERGQ96A58 199 aaPredicted RBP2.58□□□□□ -2
CDC42BPA-211ENST00000466538 CIDECQ96AQ7 238 aaPredicted RBP2.58□□□□□ -2
CDC42BPA-211ENST00000466538 L3HYPDHQ96EM0 354 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 SCGB3A2Q96PL1 93 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 EMC6Q9BV81 110 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 FBXO44Q9H4M3 255 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 KIR3DX1Q9H7L2 352 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 ZNF442Q9H7R0 627 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 GGA2Q9UJY4 613 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 CES1P1Q9UKY3 287 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 ZNF257Q9Y2Q1 563 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 UBIAD1Q9Y5Z9 338 aa2.58□□□□□ -2
CDC42BPA-211ENST00000466538 AQRO60306 1485 aaKnown RBP eCLIP2.58□□□□□ -2
CDC42BPA-211ENST00000466538 ARPC4-TTLL3A0A0A6YYG9 625 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 IGHV3-72A0A0B4J1Y9 119 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 A0A0B4J2E0 115 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 CENPVL3A0A0U1RRI6 287 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 SLC19A2O60779 497 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 UPK1BO75841 260 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 KLK1P06870 262 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 CPN2P22792 545 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 CD70P32970 193 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 CFHR2P36980 270 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 CD151P48509 253 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 NDUFA8P51970 172 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 CYP24A1Q07973 514 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 DMTNQ08495 405 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 SIGLEC14Q08ET2 396 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 NAB1Q13506 487 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 RBMY1FQ15415 496 aaKnown RBP2.57□□□□□ -2
CDC42BPA-211ENST00000466538 TSC22D1Q15714 1073 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 COX19Q49B96 90 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 RNASE13Q5GAN3 156 aaKnown RBP2.57□□□□□ -2
CDC42BPA-211ENST00000466538 KHDRBS2Q5VWX1 349 aaKnown RBP2.57□□□□□ -2
CDC42BPA-211ENST00000466538 GUSBP11Q6P575 273 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 IGFL3Q6UXB1 125 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 NDUFAF7Q7L592 441 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 IQCF2Q8IXL9 164 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 LINC00469Q8N7U9 141 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 GATSQ8NAP1 163 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 DRAXINQ8NBI3 349 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-211ENST00000466538 OR4M1Q8NGD0 313 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 OR1J4Q8NGS1 313 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 OR6K6Q8NGW6 343 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 OR52P1PQ8NH57 321 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 TCP10LQ8TDR4 215 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 MITD1Q8WV92 249 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 SLC25A46Q96AG3 418 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 KIAA1143Q96AT1 154 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-211ENST00000466538 OR10C1Q96KK4 312 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 RNF5Q99942 180 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 SULT4A1Q9BR01 284 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 OR2AG1Q9H205 316 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 MYO10Q9HD67 2058 aa2.57□□□□□ -2
CDC42BPA-211ENST00000466538 TRAV40A0A0B4J280 105 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 LINC00854A0A1B0GVQ3 168 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 OR5H1A6NKK0 313 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 NDUFC2-KCTD14E9PQ53 114 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 LINC01619G3V211 115 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 CCNKO75909 580 aa2.56□□□□□ -2
CDC42BPA-211ENST00000466538 MPZL1O95297 269 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms