RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 FOXJ3Q9UPW0 622 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 HIF3AQ9Y2N7 669 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 TPRKBQ9Y3C4 175 aa12.16□□□□□ -0.46
HMGXB4-206ENST00000466438 WI2-2373I1.2A0A1W2PRP0 233 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 ZNF879B4DU55 563 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 C22orf46C9J442 243 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 RNASEK-C17orf49H0YIS7 233 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 IFNL4K9M1U5 179 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 SLC1A7O00341 560 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 PHYHO14832 338 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 TIMM8AO60220 97 aaPredicted RBP12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 PTP4A3O75365 173 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 IFNGP01579 166 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 BGLAPP02818 100 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 ASAH2BP0C7U1 165 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 STOMP27105 288 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 NOS3P29474 1203 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 RPL4P36578 427 aaKnown RBP12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 SNRPGP62308 76 aaKnown RBP12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 HSF2Q03933 536 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 PUDPQ08623 228 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 SNAPC1Q16533 368 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 DPY19L2P2Q6ZN68 376 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 RFPL4BQ6ZWI9 263 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 LNX2Q8N448 690 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 IQCF1Q8N6M8 205 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 SCAIQ8N9R8 606 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 SCCPDHQ8NBX0 429 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 OR2Z1Q8NG97 314 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 RHOXF1Q8NHV9 184 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 CNIH3Q8TBE1 160 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 ITLN1Q8WWA0 313 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 GPX7Q96SL4 187 aaPredicted RBP12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 TMEM246Q9BRR3 403 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 MMP28Q9H239 520 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 CCNB1IP1Q9NPC3 277 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 TVP23BQ9NYZ1 205 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 IL19Q9UHD0 177 aa12.15□□□□□ -0.46
HMGXB4-206ENST00000466438 ANKRD61A6NGH8 418 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 RIIAD1A6NNX1 92 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 BHLHE40O14503 412 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 SURF4O15260 269 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 IDH3BO43837 385 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 FAM20BO75063 409 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 ZNF205O95201 554 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 OR6A2O95222 327 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 MMP7P09237 267 aaPredicted RBP12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 AHCYP23526 432 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 EEF1B2P24534 225 aaKnown RBP12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 PPP1CBP62140 327 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 EMX1Q04741 257 aaPredicted RBP12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 NSUN5P1Q3KNT7 163 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 ALG10Q5BKT4 473 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 WDR25Q64LD2 544 aaPredicted RBP12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 PXKQ7Z7A4 578 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 LYG1Q8N1E2 194 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 KLHDC1Q8N7A1 406 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 SPERTQ8NA61 448 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 OR4F17Q8NGA8 305 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 OR5J2Q8NH18 312 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 TMEM163Q8TC26 289 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 R3HDM4Q96D70 268 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 POM121L2Q96KW2 1035 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 MOGAT1Q96PD6 335 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 OR4F4Q96R69 305 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 MRPS26Q9BYN8 205 aaKnown RBP12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 FN3KQ9H479 309 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 PCDHGB5Q9Y5G0 923 aa12.14□□□□□ -0.47
HMGXB4-206ENST00000466438 DNAH1Q9P2D7 4330 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 A0A087WXM4 84 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 C5orf49A4QMS7 147 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 LRRN3E7EW58 273 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 BLOC1S5-TXNDC5H3BN57 136 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 FSTL3O95633 263 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 LIPFP07098 398 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 IGLL1P15814 213 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 ZNF3P17036 446 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 GABRB1P18505 474 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 PAICSP22234 425 aaKnown RBP12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 CRHBPP24387 322 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 BIDP55957 195 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 FXYD6P3P58550 94 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 ZNF404Q494X3 552 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 PABPC1L2AQ5JQF8 200 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 SLC25A30Q5SVS4 291 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 LRFN4Q6PJG9 635 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 TCEANCQ8N8B7 351 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 BPIFB6Q8NFQ5 453 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 TSPAN14Q8NG11 270 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 OR4Q3Q8NH05 313 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 ABHD4Q8TB40 342 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 LHX4Q969G2 390 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 RFKQ969G6 155 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 WDFY2Q96P53 400 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 OR2V2Q96R30 315 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 GCM1Q9NP62 436 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 CMC2Q9NRP2 79 aa12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 MRPL39Q9NYK5 338 aaKnown RBP12.13□□□□□ -0.47
HMGXB4-206ENST00000466438 ZNRD1Q9P1U0 126 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms