RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 UQCC2Q9BRT2 126 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 PRRG4Q9BZD6 226 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 ZDHHC11Q9H8X9 412 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 NOX3Q9HBY0 568 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 PLSCR3Q9NRY6 295 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 SLC7A10Q9NS82 523 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 EMC3Q9P0I2 261 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 SPRR3Q9UBC9 169 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 LAMA5O15230 3695 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 DOCK7Q96N67 2140 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 ARPC1BO15143 372 aaKnown RBP15.97■□□□□ 0.15
COL9A3-205ENST00000466192 CSF1P09603 554 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 GTF2F2P13984 249 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 RTP5Q14D33 572 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 DMRTC1Q5HYR2 192 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 IGFL2Q6UWQ7 119 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 OR4C16Q8NGL9 310 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 SPTSSAQ969W0 71 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 IRF2BPLQ9H1B7 796 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 TAS2R8Q9NYW2 309 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 ELF5Q9UKW6 265 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-205ENST00000466192 TMA7Q9Y2S6 64 aaKnown RBP15.97■□□□□ 0.15
COL9A3-205ENST00000466192 SPENQ96T58 3664 aaKnown RBP15.97■□□□□ 0.15
COL9A3-205ENST00000466192 MED12LQ86YW9 2145 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 CUL9Q8IWT3 2517 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 TRGV5A0A0B4J1U4 118 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 A0A0U1RQV5 110 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 ERCC1P07992 297 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-205ENST00000466192 SCRN3Q0VDG4 424 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 UNC119Q13432 240 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 SFRP5Q5T4F7 317 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 ASCL5Q7RTU5 278 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 ANGPTL5Q86XS5 388 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 SKA3Q8IX90 412 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 OR5AS1Q8N127 324 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 PAQR4Q8N4S7 273 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-205ENST00000466192 OR8S1Q8NH09 359 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 AKR7LQ8NHP1 331 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 GRPEL2Q8TAA5 225 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 GPX8Q8TED1 209 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 TMEM246Q9BRR3 403 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 LINC00470Q9BZP3 86 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 EXO5Q9H790 373 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 BCO1Q9HAY6 547 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 ZNF222Q9UK12 451 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 RAB22AQ9UL26 194 aa15.97■□□□□ 0.15
COL9A3-205ENST00000466192 PTPRZ1P23471 2315 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-205ENST00000466192 HPXP02790 462 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 CXCL3P19876 107 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 FAUP35544 74 aaKnown RBP15.96■□□□□ 0.15
COL9A3-205ENST00000466192 PSG4Q00888 419 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 FAPQ12884 760 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 DEFB109BQ30KR1 87 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 CD276Q5ZPR3 534 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 AWAT2Q6E213 333 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 PGAP1Q75T13 922 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 SLC16A14Q7RTX9 510 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 OR1F12Q8NHA8 337 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 DVL3Q92997 716 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-205ENST00000466192 PTX4Q96A99 478 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 SEH1LQ96EE3 360 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 WDYHV1Q96HA8 205 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 PARPBPQ9NWS1 579 aa15.96■□□□□ 0.15
COL9A3-205ENST00000466192 OR6C6A6NF89 314 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 ZNF724A8MTY0 619 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 SSNA1O43805 119 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 APOC1P02654 83 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 C1QBP02746 253 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 CD3DP04234 171 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 RAB6AP20340 208 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 GZMKP49863 264 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 CAPZA1P52907 286 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 HGFACQ04756 655 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 SNAI3Q3KNW1 292 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 SIGIRRQ6IA17 410 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 ZNF782Q6ZMW2 699 aaPredicted RBP15.96■□□□□ 0.14
COL9A3-205ENST00000466192 RNF122Q9H9V4 155 aa15.96■□□□□ 0.14
COL9A3-205ENST00000466192 METTL21EPA6NDL7 271 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 BPNT1O95861 308 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 LPLP06858 475 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 HCKP08631 526 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 VSIG8P0DPA2 414 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 QRFPP83859 136 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 ANGPTL6Q8NI99 470 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 CMBLQ96DG6 245 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 OR2H1Q9GZK4 316 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 WNT5BQ9H1J7 359 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 TIMM10BQ9Y5J6 103 aa15.95■□□□□ 0.14
COL9A3-205ENST00000466192 A0A0A6YYH2 397 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 TMEM235A6NFC5 223 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 A6NJ64 397 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 CPN1P15169 458 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 ERP29P30040 261 aaKnown RBP15.94■□□□□ 0.14
COL9A3-205ENST00000466192 ECH1Q13011 328 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 CHMP1BQ7LBR1 199 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 ZNF101Q8IZC7 436 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 V9GYS6 101 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 ZNF891A8MT65 544 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-205ENST00000466192 FABP7O15540 132 aa15.94■□□□□ 0.14
COL9A3-205ENST00000466192 ICMTO60725 284 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms