RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GABRA5P31644 462 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 GSK3AP49840 483 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 RPS25P62851 125 aaKnown RBP9.54□□□□□ -0.88
VCP-204ENST00000466100 TLE4Q04727 773 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 ALKBH6Q3KRA9 238 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 ZNF718Q3SXZ3 478 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 YIF1BQ5BJH7 314 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 CD200R1LQ6Q8B3 271 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 VHLLQ6RSH7 139 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 DOK3Q7L591 496 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 MRPL21Q7Z2W9 205 aaKnown RBP9.54□□□□□ -0.88
VCP-204ENST00000466100 CCDC54Q8NEL0 328 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 OR56B2PQ8NGI1 322 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 OR14K1Q8NGZ2 314 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 ITFG2Q969R8 447 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 TMIGD2Q96BF3 282 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 YIPF6Q96EC8 236 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 C14orf79Q96F83 325 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 FAM71F1Q96KD3 344 aaPredicted RBP9.54□□□□□ -0.88
VCP-204ENST00000466100 DHRS9Q9BPW9 319 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 CISD1Q9NZ45 108 aaKnown RBP9.54□□□□□ -0.88
VCP-204ENST00000466100 MYEF2Q9P2K5 600 aaKnown RBP9.54□□□□□ -0.88
VCP-204ENST00000466100 SCOCQ9UIL1 159 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 PURGQ9UJV8 347 aaKnown RBP9.54□□□□□ -0.88
VCP-204ENST00000466100 POU2F3Q9UKI9 436 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 HHLA2Q9UM44 414 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 CMAHPQ9Y471 501 aa9.54□□□□□ -0.88
VCP-204ENST00000466100 CSMD1Q96PZ7 3565 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 A0A1B0GVI7 797 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 CD300LBA8K4G0 201 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 IQCF6A8MYZ5 107 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 H3BSH0 61 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 SYT7O43581 403 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 OR4A8P0C604 315 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 MAGEB1P43366 347 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 FABP6P51161 128 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 KLF3P57682 345 aaPredicted RBP9.53□□□□□ -0.88
VCP-204ENST00000466100 INSL4Q14641 139 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 EFNB3Q15768 340 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 MST1LQ2TV78 715 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 ZBTB37Q5TC79 503 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 ASPHD2Q6ICH7 369 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 OR2T2Q6IF00 324 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 UNQ9370/PRO34162Q6UXP9 181 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 TMEM91Q6ZNR0 172 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 SYNPRQ8TBG9 265 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 GPR148Q8TDV2 347 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 PLEKHF2Q9H8W4 249 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 ZNF275Q9NSD4 429 aaPredicted RBP9.53□□□□□ -0.88
VCP-204ENST00000466100 TANC2Q9HCD6 1990 aa9.53□□□□□ -0.88
VCP-204ENST00000466100 SETXQ7Z333 2677 aaKnown RBP9.52□□□□□ -0.88
VCP-204ENST00000466100 TRBV5-7A0A0A0MS05 114 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 MTRF1O75570 445 aaKnown RBP9.52□□□□□ -0.89
VCP-204ENST00000466100 DANCRP0C864 163 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 SELEP16581 610 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 FAHP16930 419 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 PSMA1P25786 263 aaKnown RBP9.52□□□□□ -0.89
VCP-204ENST00000466100 GCH1P30793 250 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
VCP-204ENST00000466100 SERPINF1P36955 418 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 DDOSTP39656 456 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 CRYBB2P43320 205 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 MAP2K3P46734 347 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 RPL5P46777 297 aaKnown RBP9.52□□□□□ -0.89
VCP-204ENST00000466100 EVX1P49640 407 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 MMP15P51511 669 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 FABP5Q01469 135 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 TRAM1Q15629 374 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 SWI5Q1ZZU3 235 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 Q499Y3 187 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 TMEM42Q69YG0 159 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 HIST2H2BCQ6DN03 193 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 C11orf71Q6IPW1 123 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 Q6ZR03 302 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 DTX2Q86UW9 622 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 COMMD2Q86X83 199 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 MS4A15Q8N5U1 240 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 ZNF611Q8N823 705 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 SEMA6DQ8NFY4 1073 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 UBASH3BQ8TF42 649 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 IGFBPL1Q8WX77 278 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 TMEM203Q969S6 136 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 FBXW5Q969U6 566 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 ADAT3Q96EY9 351 aaPredicted RBP9.52□□□□□ -0.89
VCP-204ENST00000466100 TRMT61AQ96FX7 289 aaKnown RBP9.52□□□□□ -0.89
VCP-204ENST00000466100 DERL3Q96Q80 235 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 OR14A2Q96R54 314 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 SYT3Q9BQG1 590 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 TMED9Q9BVK6 235 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 CLEC4MQ9H2X3 399 aaPredicted RBP9.52□□□□□ -0.89
VCP-204ENST00000466100 PLK3Q9H4B4 646 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 USF3Q68DE3 2245 aa9.52□□□□□ -0.89
VCP-204ENST00000466100 GGT3PA6NGU5 568 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 ZNF879B4DU55 563 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 PIN1P1O15428 100 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 RGS9O75916 674 aaPredicted RBP9.51□□□□□ -0.89
VCP-204ENST00000466100 CST4P01036 141 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 CD8AP01732 235 aa9.51□□□□□ -0.89
VCP-204ENST00000466100 CD36P16671 472 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms