RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PARP8Q8N3A8 854 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 NEIL1Q96FI4 390 aaPredicted RBP18.18■□□□□ 0.5
LIME1-203ENST00000465591 PLEKHA8Q96JA3 519 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 FN3KRPQ9HA64 309 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 KIF17Q9P2E2 1029 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 RNF7Q9UBF6 113 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 OR5V1Q9UGF6 321 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 NOP16Q9Y3C1 178 aaKnown RBP18.18■□□□□ 0.5
LIME1-203ENST00000465591 PRR32B1ATL7 298 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 GRPP07492 148 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 GSK3AP49840 483 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 HILS1P60008 231 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 RPS7P62081 194 aaKnown RBP18.17■□□□□ 0.5
LIME1-203ENST00000465591 PTGES3Q15185 160 aaKnown RBP18.17■□□□□ 0.5
LIME1-203ENST00000465591 GFOD2Q3B7J2 385 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 SFRP4Q6FHJ7 346 aaPredicted RBP18.17■□□□□ 0.5
LIME1-203ENST00000465591 ZNF841Q6ZN19 808 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 ZNF454Q8N9F8 522 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 BOLLQ8N9W6 283 aaKnown RBP18.17■□□□□ 0.5
LIME1-203ENST00000465591 ZNF418Q8TF45 676 aaPredicted RBP18.17■□□□□ 0.5
LIME1-203ENST00000465591 DNAJC9Q8WXX5 260 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 PGAM5Q96HS1 289 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 C1orf123Q9NWV4 160 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 AUP1Q9Y679 476 aa18.17■□□□□ 0.5
LIME1-203ENST00000465591 PRKYO43930 277 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 APOC1P02654 83 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 ALOX5APP20292 161 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 DDOSTP39656 456 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 PITPNBP48739 271 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 GNB2P62879 340 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 PAX8Q06710 450 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 SCGB2A2Q13296 93 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 DCDC5Q6ZRR9 648 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 BCDIN3DQ7Z5W3 292 aaKnown RBP18.16■□□□□ 0.5
LIME1-203ENST00000465591 AMIGO2Q86SJ2 522 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 C11orf53Q8IXP5 236 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 PLPP7Q8NBV4 271 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 OR8B3Q8NGG8 313 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 OR52H1Q8NGJ2 320 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 LYZL4Q96KX0 146 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 OR8B2Q96RD0 313 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 OR10A2Q9H208 303 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 ESM1Q9NQ30 184 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 CTSZQ9UBR2 303 aa18.16■□□□□ 0.5
LIME1-203ENST00000465591 ANKRD30BLA7E2S9 258 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 C3orf80F5H4A9 247 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 MRPL3P09001 348 aaKnown RBP18.15■□□□□ 0.5
LIME1-203ENST00000465591 EGR1P18146 543 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 CPT2P23786 658 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 ACKR3P25106 362 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 PSMB10P40306 273 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 TUSC1Q2TAM9 212 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 USP43Q70EL4 1123 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 GCSAMQ8N6F7 178 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 SPERTQ8NA61 448 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 RAB3IPQ96QF0 476 aaPredicted RBP18.15■□□□□ 0.5
LIME1-203ENST00000465591 TEAD3Q99594 435 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 SP140LQ9H930 580 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 RHBDD3Q9Y3P4 386 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 LRP12Q9Y561 859 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 TENM1Q9UKZ4 2725 aa18.15■□□□□ 0.5
LIME1-203ENST00000465591 IGHV2-70DA0A0C4DH43 119 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 A6NLC8 198 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 LGALS8O00214 317 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 PSMD9O00233 223 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 TNFRSF13BO14836 293 aaPredicted RBP18.14■□□□□ 0.49
LIME1-203ENST00000465591 PSMA6P60900 246 aaKnown RBP18.14■□□□□ 0.49
LIME1-203ENST00000465591 OR8B8Q15620 311 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 WDR25Q64LD2 544 aaPredicted RBP18.14■□□□□ 0.49
LIME1-203ENST00000465591 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.14■□□□□ 0.49
LIME1-203ENST00000465591 BCL6BQ8N143 479 aaPredicted RBP18.14■□□□□ 0.49
LIME1-203ENST00000465591 OR8B12Q8NGG6 310 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 LRTOMTQ8WZ04 291 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 DUS3LQ96G46 650 aaKnown RBP18.14■□□□□ 0.49
LIME1-203ENST00000465591 KRT84Q9NSB2 600 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 ZNF69Q9UC07 566 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 COPS3Q9UNS2 423 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 AP4S1Q9Y587 144 aa18.14■□□□□ 0.49
LIME1-203ENST00000465591 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.13■□□□□ 0.49
LIME1-203ENST00000465591 C22orf46C9J442 243 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 G3V2T6 193 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 FCN3O75636 299 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 LHBP01229 141 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 FASP25445 335 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 ESRRGP62508 458 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 CSNK2BP67870 215 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 EFNB1P98172 346 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 ARMCX4Q5H9R4 360 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 SLX4IPQ5VYV7 408 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 KDM4DQ6B0I6 523 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 NLRC3Q7RTR2 1065 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 BPIFB2Q8N4F0 458 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 ZDHHC22Q8N966 263 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 OR8S1Q8NH09 359 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 RAB40AQ8WXH6 277 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 MRI1Q9BV20 369 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 TEX12Q9BXU0 123 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 TTTY10Q9BZA0 68 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 YIPF3Q9GZM5 350 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 FGF23Q9GZV9 251 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms