RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 EIF4E3Q8N5X7 224 aaKnown RBP16.18■□□□□ 0.18
SYNE4-204ENST00000465425 FADS6Q8N9I5 356 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 PNLDC1Q8NA58 520 aaKnown RBP16.18■□□□□ 0.18
SYNE4-204ENST00000465425 OR56B1Q8NGI3 324 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 OR2I1PQ8NGU4 316 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 URM1Q9BTM9 101 aaKnown RBP16.18■□□□□ 0.18
SYNE4-204ENST00000465425 RASL12Q9NYN1 266 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 GPR160Q9UJ42 338 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 CHCHD2Q9Y6H1 151 aaPredicted RBP16.18■□□□□ 0.18
SYNE4-204ENST00000465425 LY6G6EA0A0G2JKS1 128 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 TSPAN4O14817 238 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 ZNF17P17021 662 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 KLK2P20151 261 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 BTN1A1Q13410 526 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 ACTBL2Q562R1 376 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 PLAC9Q5JTB6 97 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 TMPPEQ6ZT21 453 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 HOGA1Q86XE5 327 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 TERB2Q8NHR7 220 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 FBXW5Q969U6 566 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 PGAM5Q96HS1 289 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 SHARPINQ9H0F6 387 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 WDR13Q9H1Z4 485 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 AKIRIN1Q9H9L7 192 aaPredicted RBP16.17■□□□□ 0.18
SYNE4-204ENST00000465425 U3KQA8 63 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 RNF222A6NCQ9 220 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 CCL1P22362 96 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 MICBQ29980 383 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 ARMC10Q8N2F6 343 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 C1orf147Q96MC9 270 aaPredicted RBP16.17■□□□□ 0.18
SYNE4-204ENST00000465425 ZNF416Q9BWM5 594 aa16.17■□□□□ 0.18
SYNE4-204ENST00000465425 CACNA1EQ15878 2313 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 LOC102725191A0A1B0GVB3 256 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 C13orf42A0A1B0GVH6 325 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 SLC6A9P48067 706 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 ARFRP1Q13795 201 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 ZNF239Q16600 458 aaKnown RBP16.16■□□□□ 0.18
SYNE4-204ENST00000465425 MRPL14Q6P1L8 145 aaKnown RBP16.16■□□□□ 0.18
SYNE4-204ENST00000465425 ARRDC1Q8N5I2 433 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 CLDN23Q96B33 292 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 ZNF75AQ96N20 296 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 FN3KRPQ9HA64 309 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 OCIAD1Q9NX40 245 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 GLS2Q9UI32 602 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 A0A1W2PP11 408 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 DKK1O94907 266 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 ANOS1P23352 680 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 CSNK1A1P48729 337 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 TMEM128Q5BJH2 165 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 SAP25Q8TEE9 199 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 PHYHIPLQ96FC7 376 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 ZNF160Q9HCG1 818 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 CHMP1AQ9HD42 196 aaPredicted RBP16.16■□□□□ 0.18
SYNE4-204ENST00000465425 MBD2Q9UBB5 411 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 CFAP54Q96N23 3096 aa16.16■□□□□ 0.18
SYNE4-204ENST00000465425 F5H0A9 414 aaPredicted RBP16.15■□□□□ 0.18
SYNE4-204ENST00000465425 CYC1P08574 325 aa16.15■□□□□ 0.18
SYNE4-204ENST00000465425 MSR1P21757 451 aa16.15■□□□□ 0.18
SYNE4-204ENST00000465425 LSM6P62312 80 aaKnown RBP16.15■□□□□ 0.18
SYNE4-204ENST00000465425 PNLIPRP3Q17RR3 467 aa16.15■□□□□ 0.18
SYNE4-204ENST00000465425 VAX1Q5SQQ9 334 aa16.15■□□□□ 0.18
SYNE4-204ENST00000465425 ARHGAP5-AS1Q96IT6 56 aa16.15■□□□□ 0.18
SYNE4-204ENST00000465425 OR10A2Q9H208 303 aa16.15■□□□□ 0.18
SYNE4-204ENST00000465425 GAREM1Q9H706 876 aa16.15■□□□□ 0.18
SYNE4-204ENST00000465425 FSCN3Q9NQT6 498 aa16.15■□□□□ 0.18
SYNE4-204ENST00000465425 NXT1Q9UKK6 140 aaKnown RBP16.15■□□□□ 0.18
SYNE4-204ENST00000465425 F5H5K5 113 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 BET1O15155 118 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 PRKACBP22694 351 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 NPY4RP50391 375 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 TMEM50BP56557 158 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 ECH1Q13011 328 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 DMRTC1Q5HYR2 192 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 ELP2Q6IA86 826 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 GTPBP8Q8N3Z3 284 aaPredicted RBP16.14■□□□□ 0.18
SYNE4-204ENST00000465425 GJC3Q8NFK1 279 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 OR51T1Q8NGJ9 327 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 OR5D18Q8NGL1 313 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 OR5H2Q8NGV7 314 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 OR14K1Q8NGZ2 314 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 NAT6Q93015 286 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 NELFAQ9H3P2 528 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 TAS2R3Q9NYW6 316 aa16.14■□□□□ 0.18
SYNE4-204ENST00000465425 A0A087WZY1 265 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 IGKV1-9A0A0C4DH69 117 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 NAT1P18440 290 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 ATF4P18848 351 aaPredicted RBP16.14■□□□□ 0.17
SYNE4-204ENST00000465425 PSMB6P28072 239 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 SERPINF1P36955 418 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 CBX5P45973 191 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 PCOLCEQ15113 449 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 RAET1LQ5VY80 246 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 OPN5Q6U736 354 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 NPRL2Q8WTW4 380 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 DNTTIP1Q9H147 329 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 WDR54Q9H977 334 aa16.14■□□□□ 0.17
SYNE4-204ENST00000465425 NPIPA2E9PIF3 369 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 NPIPA3F8WFD2 350 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 WDPCPO95876 746 aa16.13■□□□□ 0.17
SYNE4-204ENST00000465425 CRHP06850 196 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms