RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ACER2Q5QJU3 275 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 DDI2Q5TDH0 399 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 LGSNQ5TDP6 509 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 H3F3CQ6NXT2 135 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 CLEC18BQ6UXF7 455 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 H2BFWTQ7Z2G1 175 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 RPS19BP1Q86WX3 136 aaKnown RBP3.44□□□□□ -1.86
UBR4-209ENST00000465036 IQCKQ8N0W5 287 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 MARVELD2Q8N4S9 558 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 MAPKAPK5-AS1Q8N8E1 139 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 ZNF383Q8NA42 475 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 SDR9C7Q8NEX9 313 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 OR13C3Q8NGS6 347 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 NDNFQ8TB73 568 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 MARCH1Q8TCQ1 289 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 ACMSDQ8TDX5 336 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 HSD17B8Q92506 261 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 UBE2E3Q969T4 207 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 CMTM7Q96FZ5 175 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 C4orf45Q96LM5 186 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 SLC38A2Q96QD8 506 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 LPAR4Q99677 370 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 OR2B2Q9GZK3 357 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 ELOVL6Q9H5J4 265 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 CLMPQ9H6B4 373 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 EGLN3Q9H6Z9 239 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 LYRM4Q9HD34 91 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 INTS9Q9NV88 658 aaKnown RBP3.44□□□□□ -1.86
UBR4-209ENST00000465036 QPCTLQ9NXS2 382 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 SLC17A7Q9P2U7 560 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 STX18Q9P2W9 335 aaKnown RBP3.44□□□□□ -1.86
UBR4-209ENST00000465036 C19orf25Q9UFG5 118 aaPredicted RBP3.44□□□□□ -1.86
UBR4-209ENST00000465036 TIMM10BQ9Y5J6 103 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 USP9YO00507 2555 aaPredicted RBP3.44□□□□□ -1.86
UBR4-209ENST00000465036 SPTAN1Q13813 2472 aaKnown RBP3.44□□□□□ -1.86
UBR4-209ENST00000465036 IGHV3OR16-10A0A075B7F0 116 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 TRAV17A0A0B4J275 112 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 A0A0G2JMM0 328 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 A0A1B0GUH1 482 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 A0A1W2PPB8 328 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 A0A1W2PRS3 328 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 MEX3AA1L020 520 aaKnown RBP3.43□□□□□ -1.86
UBR4-209ENST00000465036 PINLYPA6NC86 204 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 OR5H15A6NDH6 313 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 FAM74A7A6NL05 159 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 KIR3DP1A8MWS1 328 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 G3V3Y1 287 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 DLGAP1O14490 977 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 COPEO14579 308 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 BCKDKO14874 412 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 CASKO14936 926 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 BCL2L11O43521 198 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 KIAA0513O60268 411 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 OR2J2O76002 312 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 SEMA3DO95025 777 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 LRATO95237 230 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 IGF1P05019 195 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 FCER2P06734 321 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 CT62P0C5K7 136 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 MYL2P10916 166 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 ANXA3P12429 323 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 ICAM2P13598 275 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 TAC1P20366 129 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 IMPDH1P20839 514 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 SERPINB1P30740 379 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 LCN1P31025 176 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 CD80P33681 288 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 HPCAL1P37235 193 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 RFC3P40938 356 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 CRYBB2P43320 205 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 TSFMP43897 325 aaKnown RBP3.43□□□□□ -1.86
UBR4-209ENST00000465036 TDGF1P3P51864 188 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 RAP1GDS1P52306 607 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 MLF1P58340 268 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 PLP1P60201 277 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 SKP1P63208 163 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 IGLV3-21P80748 117 aaPredicted RBP3.43□□□□□ -1.86
UBR4-209ENST00000465036 OC90Q02509 493 aaPredicted RBP3.43□□□□□ -1.86
UBR4-209ENST00000465036 ZP4Q12836 540 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 STX4Q12846 297 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 GPR176Q14439 515 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 TAF13Q15543 124 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 CHI3L2Q15782 390 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 FAM74A3Q4VXF1 159 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 FGD3Q5JSP0 725 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 BEND6Q5SZJ8 279 aaPredicted RBP3.43□□□□□ -1.86
UBR4-209ENST00000465036 CLEC6AQ6EIG7 209 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 NIPAL1Q6NVV3 410 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 STEAP1BQ6NZ63 245 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 Q6ZRG5 221 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 ZCCHC23Q6ZST2 131 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 GPRIN3Q6ZVF9 776 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 COMMD6Q7Z4G1 85 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 RANBP3LQ86VV4 465 aaPredicted RBP3.43□□□□□ -1.86
UBR4-209ENST00000465036 TMEM17Q86X19 198 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 C10orf107Q8IVU9 208 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 C9orf40Q8IXQ3 194 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 FAM58AQ8N1B3 248 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 METTL4Q8N3J2 472 aa3.43□□□□□ -1.86
UBR4-209ENST00000465036 CCNYL1Q8N7R7 359 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms