RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 DZANK1Q9NVP4 752 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 TINAGQ9UJW2 476 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 OPN1LWP04000 364 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 HKR1P10072 659 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 ACER2Q5QJU3 275 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 C1orf53Q5VUE5 145 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 ADAM5Q6NVV9 412 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 COMMD2Q86X83 199 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 BADQ92934 168 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 TCEAL3Q969E4 200 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 FAM131CQ96AQ9 280 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 RAB3CQ96E17 227 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 MRGPRX1Q96LB2 322 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 TBL1XR1Q9BZK7 514 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 CHRDQ9H2X0 955 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 RNF122Q9H9V4 155 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 WIF1Q9Y5W5 379 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 NUDT19A8MXV4 375 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 SHISA8B8ZZ34 492 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 M0R036 132 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 NME2P1O60361 137 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 IL12BP29460 328 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 P2RY4P51582 365 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 AWAT1Q58HT5 328 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 AADACL3Q5VUY0 350 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 FAM24BQ8N5W8 94 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 DTWD2Q8NBA8 298 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 POC1AQ8NBT0 407 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 ADIPOR1Q96A54 375 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF251Q9BRH9 671 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 PBOV1Q9GZY1 135 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 FAM206AQ9NX38 181 aa11.16□□□□□ -0.62
CLCNKA-204ENST00000464764 C7orf77A4D0Y5 90 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 TMEM14DPA8MWL7 114 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 MS4A18H0YCH9 400 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 UBE2CO00762 179 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 C1QL1O75973 258 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF205O95201 554 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 HOXC4P09017 264 aaPredicted RBP11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF14P17017 642 aaPredicted RBP11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 ACKR3P25106 362 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 HSD11B1P28845 292 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 MS4A18Q3C1V0 323 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 GKN2Q86XP6 184 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 SAT2Q96F10 170 aaPredicted RBP11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 RAB33BQ9H082 229 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 RAB18Q9NP72 206 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 NPIPB7O75200 414 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 NSA2O95478 260 aaKnown RBP11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 BPNT1O95861 308 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 CRABP1P29762 137 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 DHPSP49366 369 aaPredicted RBP11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 HSD17B7P56937 341 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC26A5P58743 744 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 FOXK1P85037 733 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 ARFRP1Q13795 201 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 NCMAPQ5T1S8 102 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 SEMA6DQ8NFY4 1073 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 OR10S1Q8NGN2 331 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 GPBAR1Q8TDU6 330 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 NPRL2Q8WTW4 380 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 C2orf50Q96LR7 162 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF319Q9P2F9 582 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 FBXL17Q9UF56 701 aa11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 PHF3Q92576 2039 aaKnown RBP11.15□□□□□ -0.62
CLCNKA-204ENST00000464764 CLN5O75503 358 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 TNFP01375 233 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 SMIM6P0DI80 62 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 FOLR2P14207 255 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF708P17019 499 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 TAS2R31P59538 309 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 POU3F1Q03052 451 aaPredicted RBP11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 C15orf54Q8N8G6 183 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 C11orf40Q8WZ69 217 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 SLAMF6Q96DU3 332 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 EGLN1Q9GZT9 426 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 MRPS28Q9Y2Q9 187 aaKnown RBP11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 TIMM10BQ9Y5J6 103 aa11.15□□□□□ -0.63
CLCNKA-204ENST00000464764 MFNGO00587 321 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 CRTAPO75718 401 aaPredicted RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 OR8U8P0C7N1 319 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 RPS2P15880 293 aaKnown RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 AMY2BP19961 511 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 SULT1A2P50226 295 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 DVL1P1P54792 670 aaPredicted RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 RSPO4Q2I0M5 234 aaPredicted RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 C9orf40Q8IXQ3 194 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 OR5D14Q8NGL3 314 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 OR5H2Q8NGV7 314 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 ERGIC1Q969X5 290 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 FAM71F1Q96KD3 344 aaPredicted RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 C1orf147Q96MC9 270 aaPredicted RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 CFHR5Q9BXR6 569 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 SPACA1Q9HBV2 294 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 A8MVM7 634 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 TNFRSF10CO14798 259 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 SCGB1D2O95969 90 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 GLI4P10075 376 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms