RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 HFEQ30201 348 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 CDONQ4KMG0 1287 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 AVPI1Q5T686 147 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 CYB5R2Q6BCY4 276 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 OR10AD1Q8NGE0 317 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 OR13G1Q8NGZ3 307 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 SPRYD4Q8WW59 207 aaPredicted RBP14.44□□□□□ -0.1
VPS52-215ENST00000464425 MRPL48Q96GC5 212 aaKnown RBP14.44□□□□□ -0.1
VPS52-215ENST00000464425 TMEM80Q96HE8 168 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 ZNF649Q9BS31 505 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 BRD7Q9NPI1 651 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 ERVK13-1Q9NX77 482 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 SCN3BQ9NY72 215 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 MRM2Q9UI43 246 aaKnown RBP14.44□□□□□ -0.1
VPS52-215ENST00000464425 IKZF2Q9UKS7 526 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 DIMT1Q9UNQ2 313 aaKnown RBP14.44□□□□□ -0.1
VPS52-215ENST00000464425 LRRC42Q9Y546 428 aa14.44□□□□□ -0.1
VPS52-215ENST00000464425 FN1P02751 2386 aaKnown RBP14.44□□□□□ -0.1
VPS52-215ENST00000464425 INAFM1C9JVW0 142 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 H0YL77 283 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 PSMD9O00233 223 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 SLC1A7O00341 560 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 WNT9BO14905 357 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 TACSTD2P09758 323 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 SELEP16581 610 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 IL2RGP31785 369 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 MMP16P51512 607 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 ZNF121P58317 390 aaPredicted RBP14.43□□□□□ -0.1
VPS52-215ENST00000464425 ACTA2P62736 377 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 ACTG2P63267 376 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 MVKQ03426 396 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 ST3GAL4Q11206 333 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 MED21Q13503 144 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 FAM57BQ71RH2 274 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 PRSS45Q7RTY3 260 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 OR52H1Q8NGJ2 320 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 SLC30A2Q9BRI3 323 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 TMEM100Q9NV29 134 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 UBAP1Q9NZ09 502 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 TPRKBQ9Y3C4 175 aa14.43□□□□□ -0.1
VPS52-215ENST00000464425 ANK3Q12955 4377 aaKnown RBP14.43□□□□□ -0.1
VPS52-215ENST00000464425 NIPBLQ6KC79 2804 aaeCLIP14.42□□□□□ -0.1
VPS52-215ENST00000464425 YLPM1P49750 1951 aaKnown RBP14.42□□□□□ -0.1
VPS52-215ENST00000464425 SONP18583 2426 aaKnown RBP14.42□□□□□ -0.1
VPS52-215ENST00000464425 IGHV3-64DA0A0J9YX35 117 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 TMEM269A0A1B0GVZ9 245 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 GGT3PA6NGU5 568 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 HLA-DPB1P04440 258 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 GZMKP49863 264 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 RIPPLY3P57055 190 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 PSMA6P60900 246 aaKnown RBP14.42□□□□□ -0.1
VPS52-215ENST00000464425 ZNF829Q3KNS6 432 aaPredicted RBP14.42□□□□□ -0.1
VPS52-215ENST00000464425 RBM48Q5RL73 367 aaKnown RBP14.42□□□□□ -0.1
VPS52-215ENST00000464425 LHFPL3Q86UP9 236 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 SYS1Q8N2H4 156 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 YIPF7Q8N8F6 280 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 ITLN1Q8WWA0 313 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 MYDGFQ969H8 173 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 OR2V2Q96R30 315 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 SOX7Q9BT81 388 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 REPIN1Q9BWE0 567 aaKnown RBP14.42□□□□□ -0.1
VPS52-215ENST00000464425 TTTY10Q9BZA0 68 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 DUSP21Q9H596 190 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 EXOSC1Q9Y3B2 195 aaKnown RBP14.42□□□□□ -0.1
VPS52-215ENST00000464425 PCDHGB5Q9Y5G0 923 aa14.42□□□□□ -0.1
VPS52-215ENST00000464425 CD300LBA8K4G0 201 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 CLDN25C9JDP6 229 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 F5H5P2 479 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 MAGEB4O15481 346 aaPredicted RBP14.41□□□□□ -0.1
VPS52-215ENST00000464425 MLNRO43193 412 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 SRSF10O75494 262 aaKnown RBP14.41□□□□□ -0.1
VPS52-215ENST00000464425 LIMS3P0CW19 117 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 LIMS4P0CW20 117 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 ZNF16P17020 682 aaPredicted RBP14.41□□□□□ -0.1
VPS52-215ENST00000464425 MYL12AP19105 171 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 TNFRSF1AP19438 455 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 CRHBPP24387 322 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 SLC35A2P78381 396 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 GFOD2Q3B7J2 385 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 LIPNQ5VXI9 398 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 RNLSQ5VYX0 342 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 AHSA2Q719I0 299 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 STX19Q8N4C7 294 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 HAVCR2Q8TDQ0 301 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 SGK3Q96BR1 496 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 MSI2Q96DH6 328 aaKnown RBP14.41□□□□□ -0.1
VPS52-215ENST00000464425 ALG8Q9BVK2 526 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 YTHDF1Q9BYJ9 559 aaKnown RBP14.41□□□□□ -0.1
VPS52-215ENST00000464425 FAM206AQ9NX38 181 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 CHCHD3Q9NX63 227 aaKnown RBP14.41□□□□□ -0.1
VPS52-215ENST00000464425 DCAF16Q9NXF7 216 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 ZNF319Q9P2F9 582 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 IL19Q9UHD0 177 aa14.41□□□□□ -0.1
VPS52-215ENST00000464425 NSD1Q96L73 2696 aaPredicted RBP14.4□□□□□ -0.1
VPS52-215ENST00000464425 LOC100289279A0A1B0GTE1 492 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 PTGES3LE9PB15 166 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 XRCC2O43543 280 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 CDK1P06493 297 aa14.4□□□□□ -0.1
VPS52-215ENST00000464425 HOXB4P17483 251 aaPredicted RBP14.4□□□□□ -0.1
VPS52-215ENST00000464425 ETV1P50549 477 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms