RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 A0A0G2JNG1 304 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 TMEM269A0A1B0GVZ9 245 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 A0A1W2PQU0 124 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 A8MVM7 634 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 KIR2DS3K7RE56 304 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 HSPA12AO43301 675 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 TXNL1O43396 289 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 PLRG1O43660 514 aaKnown RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 GPR137BO60478 399 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SLC16A7O60669 478 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 CLN5O75503 358 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 OR2C1O95371 312 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 HBE1P02100 147 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 PRH1P02810 166 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 BGLAPP02818 100 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SERPINA5P05154 406 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SNRNP70P08621 437 aaKnown RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 CT62P0C5K7 136 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 DANCRP0C864 163 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 NR2C1P13056 603 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 HIST1H1DP16402 221 aaKnown RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 FCARP24071 287 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 FCGR2CP31995 323 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 DRD3P35462 400 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 LPAR6P43657 344 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 P2RY1P47900 373 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SULT1A1P50225 295 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 METAP1P53582 386 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 CLDN6P56747 220 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 PKIAP61925 76 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SLC35A1P78382 337 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SPOCK1Q08629 439 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 ARFRP1Q13795 201 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 KIAA0141Q14154 515 aaPredicted RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 RBM39Q14498 530 aaKnown RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF266Q14584 549 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 IL13RA2Q14627 380 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 KIR2DS5Q14953 304 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 RSU1Q15404 277 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 ELAVL1Q15717 326 aaKnown RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 PCK2Q16822 640 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 CHRFAM7AQ494W8 412 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 OR2B11Q5JQS5 317 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SOHLH1Q5JUK2 328 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 STPG1Q5TH74 334 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 TMEM268Q5VZI3 342 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 OR52W1Q6IF63 320 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 RPUSD3Q6P087 351 aaKnown RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 CLEC18BQ6UXF7 455 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 DPPA3Q6W0C5 159 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SLC29A4Q7RTT9 530 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF101Q8IZC7 436 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF615Q8N8J6 731 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SUMF2Q8NBJ7 301 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 OR51A4Q8NGJ6 313 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 OR9A4Q8NGU2 314 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF519Q8TB69 540 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SLC25A43Q8WUT9 341 aaPredicted RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 TMEM234Q8WY98 164 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 NKD1Q969G9 470 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 C8orf44Q96CB5 159 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 ABHD14BQ96IU4 210 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 AKR1E2Q96JD6 320 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 MESP1Q9BRJ9 268 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 GINS3Q9BRX5 216 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 ADAT1Q9BUB4 502 aaKnown RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 OR10A5Q9H207 317 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 TMEM231Q9H6L2 316 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 FN3KRPQ9HA64 309 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 SPACA1Q9HBV2 294 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 MBNL1Q9NR56 388 aaKnown RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 CGGBP1Q9UFW8 167 aaPredicted RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 FAM96BQ9Y3D0 163 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 MMACHCQ9Y4U1 282 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 MRPS18BQ9Y676 258 aaKnown RBP6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 CUL9Q8IWT3 2517 aa6.39□□□□□ -1.39
CLSTN1-204ENST00000464286 FAM230AA0A1W2PPH8 454 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 FITM1A5D6W6 292 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 FRG2CA6NGY1 282 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 CCDC85CA6NKD9 419 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 TMEM14DPA8MWL7 114 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 FAM157AC9JC47 383 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF587BE7ETH6 402 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 PPP1R2P9O14990 202 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 RRP8O43159 456 aaKnown RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 NARSO43776 548 aaKnown RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ICOSLGO75144 302 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 DEDDO75618 318 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 IGKV1D-16P01601 117 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 PMP2P02689 132 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 CTSDP07339 412 aaPredicted RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 CT45A8P0DMV1 189 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 CT45A9P0DMV2 189 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ACKR3P25106 362 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 GDI1P31150 447 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 NTF4P34130 210 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ZNF93P35789 620 aaPredicted RBP6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 ACTR1BP42025 376 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 GPR3P46089 330 aa6.38□□□□□ -1.39
CLSTN1-204ENST00000464286 PPM1FP49593 454 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms