RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SCN3BQ9NY72 215 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 ZNF319Q9P2F9 582 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 DIMT1Q9UNQ2 313 aaKnown RBP16.84■□□□□ 0.29
COL9A3-204ENST00000463487 EXOSC1Q9Y3B2 195 aaKnown RBP16.84■□□□□ 0.29
COL9A3-204ENST00000463487 SRSF10O75494 262 aaKnown RBP16.83■□□□□ 0.28
COL9A3-204ENST00000463487 PNPP00491 289 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 HTR1AP08908 422 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 PRSS12P56730 875 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 SLC3A1Q07837 685 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 OR8B8Q15620 311 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 HFEQ30201 348 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 Q6ZR03 302 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 ELMOD2Q8IZ81 293 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 BPIFB6Q8NFQ5 453 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 OR51E1Q8TCB6 317 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 RORBQ92753 470 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 C4orf36Q96KX1 117 aa16.83■□□□□ 0.28
COL9A3-204ENST00000463487 ZNF184Q99676 751 aaPredicted RBP16.83■□□□□ 0.28
COL9A3-204ENST00000463487 ADAT1Q9BUB4 502 aaKnown RBP16.83■□□□□ 0.28
COL9A3-204ENST00000463487 NCR1O76036 304 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 TTRP02766 147 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 RPSAP08865 295 aaKnown RBP16.82■□□□□ 0.28
COL9A3-204ENST00000463487 UBCP0CG48 685 aaKnown RBP16.82■□□□□ 0.28
COL9A3-204ENST00000463487 ZNF12P17014 697 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 CA6P23280 308 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 CRYBB2P43320 205 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 GBX2P52951 348 aaPredicted RBP16.82■□□□□ 0.28
COL9A3-204ENST00000463487 OR12D2P58182 307 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 DNM1P46Q6ZS02 220 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 CATSPERDQ86XM0 798 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 STX19Q8N4C7 294 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 CELF2-AS1Q8N7Q2 184 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 CCDC54Q8NEL0 328 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 OR10AD1Q8NGE0 317 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 OR8S1Q8NH09 359 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 C10orf105Q8TEF2 133 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 OR2V2Q96R30 315 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 G6PC2Q9NQR9 355 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 GPR84Q9NQS5 396 aa16.82■□□□□ 0.28
COL9A3-204ENST00000463487 CAB39Q9Y376 341 aaPredicted RBP16.82■□□□□ 0.28
COL9A3-204ENST00000463487 A0A1B0GVI7 797 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 A0A1B0GWJ7 208 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 ANXA2P2A6NMY6 339 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 IFNL4K9M1U5 179 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 DHRS3O75911 302 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 ANOS1P23352 680 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 TMEM33P57088 247 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 ST3GAL4Q11206 333 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 TNK1Q13470 666 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 C6orf141Q5SZD1 244 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 AHSA2Q719I0 299 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 DOK3Q7L591 496 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 PEG10Q86TG7 708 aaKnown RBP16.81■□□□□ 0.28
COL9A3-204ENST00000463487 KLHL36Q8N4N3 616 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 SEMA6DQ8NFY4 1073 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 TIMD4Q96H15 378 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 FAM71F1Q96KD3 344 aaPredicted RBP16.81■□□□□ 0.28
COL9A3-204ENST00000463487 PAPOLGQ9BWT3 736 aaKnown RBP16.81■□□□□ 0.28
COL9A3-204ENST00000463487 C14orf119Q9NWQ9 140 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 PSORS1C1Q9UIG5 152 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 TPRKBQ9Y3C4 175 aa16.81■□□□□ 0.28
COL9A3-204ENST00000463487 ZNF816-ZNF321PA0A0X1KG74 233 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 CLDN25C9JDP6 229 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 XPNPEP2O43895 674 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 LILRA1O75019 489 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 CD99P14209 185 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 GIFP27352 417 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 RIPPLY1Q0D2K3 151 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 ZBTB37Q5TC79 503 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 FDX2Q6P4F2 183 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 GGHQ92820 318 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 MYDGFQ969H8 173 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 PELI1Q96FA3 418 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 LYZL4Q96KX0 146 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 CNBD2Q96M20 576 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 HIST1H2AAQ96QV6 131 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 PLEKHA1Q9HB21 404 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 PPP1R3CQ9UQK1 317 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 MPC1Q9Y5U8 109 aa16.8■□□□□ 0.28
COL9A3-204ENST00000463487 IGHV4-30-2A0A087WSY4 118 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 TRIM64A6NGJ6 449 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 TRIM64BA6NI03 449 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 DHRS7CA6NNS2 312 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 F5H5P2 479 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 SLC1A7O00341 560 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 MLNRO43193 412 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 SYT7O43581 403 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 CDC14BO60729 498 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 IGLV3-1P01715 115 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 HLA-DPB1P04440 258 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 CCDC159P0C7I6 412 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 PSMB10P40306 273 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 CD200P41217 278 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 CCR9P51686 369 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 WDR38Q5JTN6 314 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 TMEM244Q5VVB8 128 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 OR2G2Q8NGZ5 317 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 ITLN1Q8WWA0 313 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 CCL17Q92583 94 aa16.79■□□□□ 0.28
COL9A3-204ENST00000463487 ERGIC1Q969X5 290 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms