RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 CPB2Q96IY4 423 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 B3GALT6Q96L58 329 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 CCDC42Q96M95 316 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 FOXN4Q96NZ1 517 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 SCGB3A2Q96PL1 93 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 UTP23Q9BRU9 249 aaKnown RBP4.16□□□□□ -1.74
COPS3-205ENST00000463097 TIPINQ9BVW5 301 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 BBS2Q9BXC9 721 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 FRMD8P1Q9BZ68 369 aaPredicted RBP4.16□□□□□ -1.74
COPS3-205ENST00000463097 CHRNA10Q9GZZ6 450 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 GOLPH3Q9H4A6 298 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 NRBP2Q9NSY0 501 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 SLC17A7Q9P2U7 560 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 F11RQ9Y624 299 aaKnown RBP4.16□□□□□ -1.74
COPS3-205ENST00000463097 SPEF2Q9C093 1822 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 CPS1P31327 1500 aa4.16□□□□□ -1.74
COPS3-205ENST00000463097 NALCNQ8IZF0 1738 aa4.15□□□□□ -1.74
COPS3-205ENST00000463097 A0A1B0GW15 77 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 FAM166BA8MTA8 275 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 PRMT5O14744 637 aaPredicted RBP4.15□□□□□ -1.75
COPS3-205ENST00000463097 SC5DO75845 299 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 RAB3DO95716 219 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 EIF4EP06730 217 aaKnown RBP4.15□□□□□ -1.75
COPS3-205ENST00000463097 GNAO1P09471 354 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 PSMD7P51665 324 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 NCBP2P52298 156 aaKnown RBP eCLIP4.15□□□□□ -1.75
COPS3-205ENST00000463097 MAP3K7CLP57077 242 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 TAS2R39P59534 338 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 RPL26P61254 145 aaKnown RBP4.15□□□□□ -1.75
COPS3-205ENST00000463097 LRRC63Q05C16 580 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 C2orf54Q08AI8 447 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 TNXAQ16473 311 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 RFX4Q33E94 735 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 GCSAMLQ5JQS6 135 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 FRMPD2BQ6IN97 320 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 APOBEC3HQ6NTF7 200 aaKnown RBP4.15□□□□□ -1.75
COPS3-205ENST00000463097 GTSCR1Q86UQ5 136 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 CD177Q8N6Q3 437 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 WDR31Q8NA23 367 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 CHST4Q8NCG5 386 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 MDS2Q8NDY4 140 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 CCDC54Q8NEL0 328 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 LGALS14Q8TCE9 139 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 ACTRT1Q8TDG2 376 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 FAM222BQ8WU58 562 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 CDKL2Q92772 493 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 RCN3Q96D15 328 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 TMEM101Q96IK0 257 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 TRNT1Q96Q11 434 aaKnown RBP4.15□□□□□ -1.75
COPS3-205ENST00000463097 UQCC2Q9BRT2 126 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 ULBP2Q9BZM5 246 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 TRIM4Q9C037 500 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 SLCO1B3Q9NPD5 702 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 CLEC2DQ9UHP7 191 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 HEBP2Q9Y5Z4 205 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 HCFC1P51610 2035 aa4.15□□□□□ -1.75
COPS3-205ENST00000463097 AKAP12Q02952 1782 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 LRRK1Q38SD2 2015 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 CIB4A0PJX0 185 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 ANKRD63C9JTQ0 380 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 BIRC5O15392 142 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 TRAPPC6AO75865 159 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 CIAO1O76071 339 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 DEXIO95424 95 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 CST4P01036 141 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 RPN2P04844 631 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 RHOCP08134 193 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 OR8U9P0C7N5 309 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 NQO2P16083 231 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 RAB3BP20337 219 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 CNR1P21554 472 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 IL32P24001 234 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 MT3P25713 68 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 RBMXP38159 391 aaKnown RBP4.14□□□□□ -1.75
COPS3-205ENST00000463097 VEGFCP49767 419 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 AP1S2P56377 157 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 VSX2P58304 361 aaPredicted RBP4.14□□□□□ -1.75
COPS3-205ENST00000463097 NCALDP61601 193 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 PAFAH1B2P68402 229 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 TCP10Q12799 353 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 QPRTQ15274 297 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 NDUFAF6Q330K2 333 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 C9orf129Q5T035 196 aaKnown RBP4.14□□□□□ -1.75
COPS3-205ENST00000463097 KCTD16Q68DU8 428 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 DUPD1Q68J44 220 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 CLEC6AQ6EIG7 209 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 ZNF493Q6ZR52 646 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 ABHD13Q7L211 337 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 ABHD12BQ7Z5M8 362 aaPredicted RBP4.14□□□□□ -1.75
COPS3-205ENST00000463097 ERO1BQ86YB8 467 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 NPWQ8N729 165 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 OR8U1Q8NH10 309 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 CAPZA3Q96KX2 299 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 LZTS2Q9BRK4 669 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 YIPF3Q9GZM5 350 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 ARL2BPQ9Y2Y0 163 aa4.14□□□□□ -1.75
COPS3-205ENST00000463097 PIK3C2AO00443 1686 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 F8VZ95 297 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 H7C1H1 209 aa4.13□□□□□ -1.75
COPS3-205ENST00000463097 RDH16O75452 317 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms