RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SLC2A1P11166 492 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 PAICSP22234 425 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 LIPAP38571 399 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC6A9P48067 706 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 PRKXP51817 358 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 TPTEP56180 551 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 DEFA6Q01524 100 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 PAX2Q02962 417 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC3A1Q07837 685 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZMYND11Q15326 602 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC9A3R2Q15599 337 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 TMEM155Q4W5P6 130 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 KLHL12Q53G59 568 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 GLYATL3Q5SZD4 288 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 AADACL4Q5VUY2 407 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZFP1Q6P2D0 407 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 DRAM2Q6UX65 266 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 C9orf139Q6ZV77 190 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 SPATC1Q76KD6 591 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZNF283Q8N7M2 679 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR10AD1Q8NGE0 317 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR5L1Q8NGL2 311 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 ITLN1Q8WWA0 313 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 SPTSSAQ969W0 71 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 KCNJ15Q99712 375 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC30A2Q9BRI3 323 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 EGLN1Q9GZT9 426 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 PATZ1Q9HBE1 687 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 TMEM106BQ9NUM4 274 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 USE1Q9NZ43 259 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZNF319Q9P2F9 582 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZDHHC8Q9ULC8 765 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 COPS3Q9UNS2 423 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 INSIG2Q9Y5U4 225 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 AUP1Q9Y679 476 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 KMT2CQ8NEZ4 4911 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 MDFIC2A0A1B0GVS7 189 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 EI24O14681 340 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 PLATP00750 562 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 LYNP07948 512 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 MRPL3P09001 348 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 ALOX5APP20292 161 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 MDKP21741 143 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 CX3CR1P49238 355 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 GSK3AP49840 483 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 HCCSP53701 268 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZNF121P58317 390 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 BTG1P62324 171 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 GRB2P62993 217 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 TNFAIP6P98066 277 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 BAMBIQ13145 260 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZMAT1Q5H9K5 638 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 SHFQ7M4L6 423 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC16A9Q7RTY1 509 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 LRRC28Q86X40 367 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 SPICQ8N5J4 248 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 TCEANCQ8N8B7 351 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 BHLHE23Q8NDY6 225 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR8G5Q8NG78 346 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR2Z1Q8NG97 314 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 TMEM163Q8TC26 289 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 SPSB4Q96A44 273 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 PLEKHA8Q96JA3 519 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 MEGF10Q96KG7 1140 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR2V2Q96R30 315 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 DIRC2Q96SL1 478 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 MBOAT4Q96T53 435 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 TEAD3Q99594 435 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 RBM4BQ9BQ04 359 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 TOR3AQ9H497 397 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 RIBC2Q9H4K1 309 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 S100A14Q9HCY8 104 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 CENPMQ9NSP4 180 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 NBEAL2Q6ZNJ1 2754 aa6.62□□□□□ -1.35
CDC42BPA-210ENST00000462553 IGHV3OR16-10A0A075B7F0 116 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 hCG_38984A0A1B0GV85 526 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 CD300LBA8K4G0 201 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 CEACAM18A8MTB9 384 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 F5H5P2 479 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 SBK2P0C263 348 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 SELEP16581 610 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 CD80P33681 288 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 RAD23AP54725 363 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 RPS7P62081 194 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 IL13RA1P78552 427 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 PAX8Q06710 450 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 MALLQ13021 153 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 MIDNQ504T8 468 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 LCN1P1Q5VSP4 162 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 NXNL2Q5VZ03 156 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 LRRN1Q6UXK5 716 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 RBMS3Q6XE24 437 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 PGAP1Q75T13 922 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 RHOUQ7L0Q8 258 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 MEPCEQ7L2J0 689 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 PQLC1Q8N2U9 271 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 KLHL36Q8N4N3 616 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR56B2PQ8NGI1 322 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 WFDC12Q8WWY7 111 aa6.61□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC25A28Q96A46 364 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms