RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CCL19Q99731 98 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 TEX12Q9BXU0 123 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 KCNN2Q9H2S1 579 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 POFUT1Q9H488 388 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 NIPAL2Q9H841 368 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 ELOVL3Q9HB03 270 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 FKBP14Q9NWM8 211 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 CLN6Q9NWW5 311 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 PLEK2Q9NYT0 353 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 ZNF319Q9P2F9 582 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 MYEF2Q9P2K5 600 aaKnown RBP4.88□□□□□ -1.63
VPS36-202ENST00000462289 COPS3Q9UNS2 423 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 CMAHPQ9Y471 501 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 DSCAML1Q8TD84 2053 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.63
VPS36-202ENST00000462289 A0A0U1RQV5 110 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 LOC390937A0A1W2PQ73 354 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 C5orf63A6NC05 138 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 IQCF6A8MYZ5 107 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 M0R135 149 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 ENTPD6O75354 484 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 ZNF254O75437 659 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 RP2O75695 350 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 SULT1C4O75897 302 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 IGHV4-39P01824 125 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 ADRA2AP08913 450 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 OR2T7P0C7T2 308 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 CCL1P22362 96 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 DNASE1P24855 282 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 GIFP27352 417 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 LIPAP38571 399 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 MPV17P39210 176 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 CAPZA2P47755 286 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 MTNR1AP48039 350 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 EFNA4P52798 201 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 PPP1CBP62140 327 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 GRB2P62993 217 aaKnown RBP4.87□□□□□ -1.63
VPS36-202ENST00000462289 ZNF85Q03923 595 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 PSG7Q13046 419 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 MAD2L1BPQ15013 274 aaPredicted RBP4.87□□□□□ -1.63
VPS36-202ENST00000462289 OR8B8Q15620 311 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 TRIP10Q15642 601 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 LCN1P1Q5VSP4 162 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 SHEQ5VZ18 495 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 TTC23Q5W5X9 447 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 KRT80Q6KB66 452 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 UNQ6126/PRO20091Q6UXV3 157 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 Q6ZR03 302 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 SSX6Q7RTT6 188 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 LRP11Q86VZ4 500 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 ZNF679Q8IYX0 411 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 FBXL14Q8N1E6 418 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 OR2T27Q8NH04 317 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 FAM81AQ8TBF8 368 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 ASB17Q8WXJ9 295 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 RFKQ969G6 155 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 ZNF799Q96GE5 643 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 IL4I1Q96RQ9 567 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 CNN2Q99439 309 aaKnown RBP4.87□□□□□ -1.63
VPS36-202ENST00000462289 ADI1Q9BV57 179 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 OR2J1Q9GZK6 312 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 RIBC2Q9H4K1 309 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 CXorf56Q9H5V9 222 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 OPA3Q9H6K4 179 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 RNF121Q9H920 327 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 UBTD1Q9HAC8 227 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 CDH20Q9HBT6 801 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 FGF20Q9NP95 211 aaPredicted RBP4.87□□□□□ -1.63
VPS36-202ENST00000462289 PLCXD1Q9NUJ7 323 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 FAM206AQ9NX38 181 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 NUFIP1Q9UHK0 495 aaKnown RBP4.87□□□□□ -1.63
VPS36-202ENST00000462289 MRM2Q9UI43 246 aaKnown RBP4.87□□□□□ -1.63
VPS36-202ENST00000462289 ZNF391Q9UJN7 358 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS36-202ENST00000462289 LAMP3Q9UQV4 416 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 STARD10Q9Y365 291 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 SPEF1Q9Y4P9 236 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 TMEM14AQ9Y6G1 99 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 NF1P21359 2839 aa4.87□□□□□ -1.63
VPS36-202ENST00000462289 ANK3Q12955 4377 aaKnown RBP4.87□□□□□ -1.63
VPS36-202ENST00000462289 A0A0A6YYJ9 748 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 hCG_38984A0A1B0GV85 526 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 TRIM64A6NGJ6 449 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 ERICH4A6NGS2 130 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 ZSCAN5BA6NJL1 495 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 DHRS7CA6NNS2 312 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 C17orf100A8MU93 164 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 M0R233 179 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 PHYHO14832 338 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 NDUFS7O75251 213 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 NCR1O76036 304 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 ATP6V1G2O95670 118 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 CLPTM1O96005 669 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 PNPP00491 289 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 APOC1P02654 83 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 LYNP07948 512 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 GNAO1P09471 354 aa4.86□□□□□ -1.63
VPS36-202ENST00000462289 DBTP11182 482 aaKnown RBP4.86□□□□□ -1.63
VPS36-202ENST00000462289 PIPP12273 146 aaPredicted RBP4.86□□□□□ -1.63
VPS36-202ENST00000462289 ZNF823P16415 610 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms