RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 GRPP07492 148 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 CFL1P23528 166 aaKnown RBP18.91■□□□□ 0.62
PTPN4-207ENST00000460162 CFHR2P36980 270 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 FAM3AP98173 230 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 C11orf91Q3C1V1 193 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 BRD3OSQ6XYD6 125 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 SPATC1Q76KD6 591 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 DPY19L4Q7Z388 723 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 ERI1Q8IV48 349 aaKnown RBP18.91■□□□□ 0.62
PTPN4-207ENST00000460162 OR52H1Q8NGJ2 320 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 LRGUKQ96M69 825 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 CCT8L2Q96SF2 557 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 MARCH7Q9H992 704 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 SOX21Q9Y651 276 aaPredicted RBP18.91■□□□□ 0.62
PTPN4-207ENST00000460162 hCG_38984A0A1B0GV85 526 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 MDFIC2A0A1B0GVS7 189 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 ZNF879B4DU55 563 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 H3BN98 237 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 P2RY10O00398 339 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 TNFRSF13BO14836 293 aaPredicted RBP18.9■□□□□ 0.62
PTPN4-207ENST00000460162 TMPRSS2O15393 492 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 GSTT1P30711 240 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 PRR31Q5SQ13 230 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 TEX36Q5VZQ5 186 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 ZNF826PQ6ZT77 177 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 FAM90A1Q86YD7 464 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 PNLDC1Q8NA58 520 aaKnown RBP18.9■□□□□ 0.62
PTPN4-207ENST00000460162 GIPC3Q8TF64 312 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 CCDC124Q96CT7 223 aaKnown RBP18.9■□□□□ 0.62
PTPN4-207ENST00000460162 REEP6Q96HR9 211 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 PCGF1Q9BSM1 259 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 ABHD6Q9BV23 337 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 SMURF1Q9HCE7 757 aa18.9■□□□□ 0.62
PTPN4-207ENST00000460162 FAM183AA6NL82 134 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 TIPRLO75663 272 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 GLCEO94923 617 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 LHBP01229 141 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 PAICSP22234 425 aaKnown RBP18.89■□□□□ 0.61
PTPN4-207ENST00000460162 DEFB112Q30KQ8 113 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 SHFQ7M4L6 423 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 PRSS45Q7RTY3 260 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 IQCF1Q8N6M8 205 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 FEVQ99581 238 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 ZNF696Q9H7X3 374 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 MED20Q9H944 212 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 UNKLQ9H9P5 680 aaKnown RBP18.89■□□□□ 0.61
PTPN4-207ENST00000460162 RNPEPL1Q9HAU8 725 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 KAAG1Q9UBP8 84 aa18.89■□□□□ 0.61
PTPN4-207ENST00000460162 PKD1L1Q8TDX9 2849 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 POM121CA8CG34 1229 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 SRRM5B3KS81 715 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 HOXA3O43365 443 aaPredicted RBP18.88■□□□□ 0.61
PTPN4-207ENST00000460162 TOX4O94842 621 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 FAM107AO95990 144 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 CST1P01037 141 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 GYPAP02724 150 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 MMP9P14780 707 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 OPRL1P41146 370 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 ZNF121P58317 390 aaPredicted RBP18.88■□□□□ 0.61
PTPN4-207ENST00000460162 SNCBQ16143 134 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 C16orf87Q6PH81 154 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 FAM57BQ71RH2 274 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 WDR86Q86TI4 376 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 FTMTQ8N4E7 242 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 CCDC197Q8NCU1 140 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 ZDHHC16Q969W1 377 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 SGK3Q96BR1 496 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 OR10A2Q9H208 303 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 RGCCQ9H4X1 137 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 NOX4Q9NPH5 578 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 DNAJC27Q9NZQ0 273 aa18.88■□□□□ 0.61
PTPN4-207ENST00000460162 ECDO95905 644 aaPredicted RBP18.87■□□□□ 0.61
PTPN4-207ENST00000460162 SFTPBP07988 381 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 HOXB6P17509 224 aaKnown RBP18.87■□□□□ 0.61
PTPN4-207ENST00000460162 METTL11BQ5VVY1 283 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 MEGF8Q7Z7M0 2845 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 TIGD4Q8IY51 512 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 ADGRG5Q8IZF4 528 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 CSNK2A3Q8NEV1 391 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 OR1M1Q8NGA1 313 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 OTULINQ96BN8 352 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 WDFY2Q96P53 400 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 TBX15Q96SF7 602 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 AMELYQ99218 206 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 CHID1Q9BWS9 393 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 C1orf21Q9H246 121 aa18.87■□□□□ 0.61
PTPN4-207ENST00000460162 T-ENOLP0DO92 83 aa18.86■□□□□ 0.61
PTPN4-207ENST00000460162 MUC1P15941 1255 aaPredicted RBP18.86■□□□□ 0.61
PTPN4-207ENST00000460162 GNALP38405 381 aa18.86■□□□□ 0.61
PTPN4-207ENST00000460162 RUSC1-AS1Q66K80 236 aa18.86■□□□□ 0.61
PTPN4-207ENST00000460162 TMEM86BQ8N661 226 aa18.86■□□□□ 0.61
PTPN4-207ENST00000460162 LRRC29Q8WV35 223 aa18.86■□□□□ 0.61
PTPN4-207ENST00000460162 GATAD2BQ8WXI9 593 aa18.86■□□□□ 0.61
PTPN4-207ENST00000460162 PAPOLGQ9BWT3 736 aaKnown RBP18.86■□□□□ 0.61
PTPN4-207ENST00000460162 SIRPDQ9H106 197 aa18.86■□□□□ 0.61
PTPN4-207ENST00000460162 AQP12BA6NM10 295 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 PRR23D1E9PI22 279 aaPredicted RBP18.85■□□□□ 0.61
PTPN4-207ENST00000460162 DVL1O14640 695 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 ACOT8O14734 319 aa18.85■□□□□ 0.61
PTPN4-207ENST00000460162 PRODHO43272 600 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms