RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 Q9UFV3 132 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 GRIP1Q9Y3R0 1128 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 LHFPL6Q9Y693 200 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 SHANK1Q9Y566 2161 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 J3QLW9 94 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 RER1O15258 196 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 LYZL6O75951 148 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 PRF1P14222 555 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 ZNF19P17023 458 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 BMP5P22003 454 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 ANOS1P23352 680 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 DCKP27707 260 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 PSMB10P40306 273 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 BEX5Q5H9J7 111 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 C10orf128Q5T292 105 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 CFAP77Q6ZQR2 320 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 SLC16A9Q7RTY1 509 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 CDC20BQ86Y33 519 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 SPRYD4Q8WW59 207 aaPredicted RBP9.02□□□□□ -0.96
USP39-210ENST00000459775 PPP1R14AQ96A00 147 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 FBXO17Q96EF6 278 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 ALG8Q9BVK2 526 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 CDCA4Q9BXL8 241 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 MRPS26Q9BYN8 205 aaKnown RBP9.02□□□□□ -0.96
USP39-210ENST00000459775 TP63Q9H3D4 680 aaPredicted RBP9.02□□□□□ -0.96
USP39-210ENST00000459775 POLE4Q9NR33 117 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 PARPBPQ9NWS1 579 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 PEF1Q9UBV8 284 aaKnown RBP9.02□□□□□ -0.96
USP39-210ENST00000459775 STARD10Q9Y365 291 aa9.02□□□□□ -0.96
USP39-210ENST00000459775 SIRT4Q9Y6E7 314 aaPredicted RBP9.02□□□□□ -0.96
USP39-210ENST00000459775 TMEM238C9JI98 176 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 AKAP8O43823 692 aaKnown RBP9.02□□□□□ -0.97
USP39-210ENST00000459775 IL18BPO95998 194 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 IL2RAP01589 272 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 CRHP06850 196 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 ITGA5P08648 1049 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 ZNF823P16415 610 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 MYL12AP19105 171 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 ALOX5APP20292 161 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 NR4A1P22736 598 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 PSMB9P28065 219 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 OR3A2P47893 321 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 CEBPGP53567 150 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 GP2P55259 537 aaKnown RBP9.02□□□□□ -0.97
USP39-210ENST00000459775 EIF2B1Q14232 305 aaKnown RBP9.02□□□□□ -0.97
USP39-210ENST00000459775 ENDOGQ14249 297 aaKnown RBP9.02□□□□□ -0.97
USP39-210ENST00000459775 TBCEQ15813 527 aaPredicted RBP9.02□□□□□ -0.97
USP39-210ENST00000459775 DNM1P34Q6PK57 102 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 PRSS57Q6UWY2 283 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 LRRN1Q6UXK5 716 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 LUZP2Q86TE4 346 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 SKA3Q8IX90 412 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 NANOGP1Q8N7R0 232 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 SLC7A6Q92536 515 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 C4orf36Q96KX1 117 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 SSX3Q99909 188 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 TOLLIPQ9H0E2 274 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 OR51M1Q9H341 326 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 TMEM38BQ9NVV0 291 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 SLCO1C1Q9NYB5 712 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 LSM2Q9Y333 95 aaKnown RBP9.02□□□□□ -0.97
USP39-210ENST00000459775 EMC9Q9Y3B6 208 aa9.02□□□□□ -0.97
USP39-210ENST00000459775 DOCK7Q96N67 2140 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 H3BSH0 61 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 CGAP01215 116 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 STAG3L2P0CL84 134 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 IGHV1-2P23083 117 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 GPX4P36969 197 aaPredicted RBP9.01□□□□□ -0.97
USP39-210ENST00000459775 ZNF133P52736 654 aaPredicted RBP9.01□□□□□ -0.97
USP39-210ENST00000459775 IL18Q14116 193 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 CHRFAM7AQ494W8 412 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 FBXW9Q5XUX1 488 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 SSX9Q7RTT3 188 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 KLBQ86Z14 1044 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 FAM185AQ8N0U4 392 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 POMGNT2Q8NAT1 580 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 ZNF485Q8NCK3 441 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 ST6GALNAC3Q8NDV1 305 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 STEAP2Q8NFT2 490 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 OR10S1Q8NGN2 331 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 OTOSQ8NHW6 89 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 HSD17B8Q92506 261 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 FOXB1Q99853 325 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 ABHD6Q9BV23 337 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 GAL3ST2Q9H3Q3 398 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 NOX3Q9HBY0 568 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 CCNB1IP1Q9NPC3 277 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 ACOXLQ9NUZ1 547 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 FBXL3Q9UKT7 428 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 POLR1DQ9Y2S0 133 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 DOPEY2Q9Y3R5 2298 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 SMIM30A4D0T7 59 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 A8MV72 311 aaPredicted RBP9.01□□□□□ -0.97
USP39-210ENST00000459775 ZNF587BE7ETH6 402 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 TCAPO15273 167 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 NXPH2O95156 264 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 HLA-HP01893 362 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 OR2T7P0C7T2 308 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 PTAFRP25105 342 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 CEACAM8P31997 349 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms