RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 RGCCQ9H4X1 137 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 OCEL1Q9H607 264 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 NIPAL2Q9H841 368 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 UFSP2Q9NUQ7 469 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 DNAJC27Q9NZQ0 273 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 OPN4Q9UHM6 478 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 EPHA1P21709 976 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 SRSF2Q01130 221 aaKnown RBP13.5□□□□□ -0.25
COL7A1-203ENST00000459756 LCN1P1Q5VSP4 162 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 ZFP1Q6P2D0 407 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 NLRC3Q7RTR2 1065 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 PGAM5Q96HS1 289 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 TEAD3Q99594 435 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 C19orf24Q9BVV8 132 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 SSBP3Q9BWW4 388 aaPredicted RBP13.5□□□□□ -0.25
COL7A1-203ENST00000459756 YIPF3Q9GZM5 350 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 GABARAPL1Q9H0R8 117 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 MMP26Q9NRE1 261 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 C14orf119Q9NWQ9 140 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 RNF7Q9UBF6 113 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 OR5V1Q9UGF6 321 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 ENOPH1Q9UHY7 261 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 LAMP5Q9UJQ1 280 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 KLHDC2Q9Y2U9 406 aa13.5□□□□□ -0.25
COL7A1-203ENST00000459756 hCG_38984A0A1B0GV85 526 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 TRAPPC2LH3BP13 241 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 ZNF12P17014 697 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 ADRA2CP18825 462 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 ALOX5APP20292 161 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 GSK3AP49840 483 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 PSMA6P60900 246 aaKnown RBP13.49□□□□□ -0.25
COL7A1-203ENST00000459756 ZNF154Q13106 437 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 KCNJ8Q15842 424 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 SNCBQ16143 134 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 GFOD2Q3B7J2 385 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 FAM201AQ5SY85 155 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 KDM4DQ6B0I6 523 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 KCTD18Q6PI47 426 aaPredicted RBP13.49□□□□□ -0.25
COL7A1-203ENST00000459756 DCDC5Q6ZRR9 648 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 DEFB108BQ8NET1 73 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 CSNK2A3Q8NEV1 391 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 OR8S1Q8NH09 359 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 ZNF418Q8TF45 676 aaPredicted RBP13.49□□□□□ -0.25
COL7A1-203ENST00000459756 DVL3Q92997 716 aaPredicted RBP13.49□□□□□ -0.25
COL7A1-203ENST00000459756 NEIL1Q96FI4 390 aaPredicted RBP13.49□□□□□ -0.25
COL7A1-203ENST00000459756 S100A14Q9HCY8 104 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 BRD7Q9NPI1 651 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 ZNF319Q9P2F9 582 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 ZNF391Q9UJN7 358 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 INSIG2Q9Y5U4 225 aa13.49□□□□□ -0.25
COL7A1-203ENST00000459756 CCDC182A6NF36 153 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 PRKYO43930 277 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 MITFO75030 526 aaPredicted RBP13.48□□□□□ -0.25
COL7A1-203ENST00000459756 BAG2O95816 211 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 FSHBP01225 129 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 GNB2P62879 340 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 SLX4IPQ5VYV7 408 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 DEGS2Q6QHC5 323 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 LRRN1Q6UXK5 716 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 KRT77Q7Z794 578 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 C10orf67Q8IYJ2 551 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 FTMTQ8N4E7 242 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 OR8B3Q8NGG8 313 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 CENPNQ96H22 339 aaPredicted RBP13.48□□□□□ -0.25
COL7A1-203ENST00000459756 OR8B2Q96RD0 313 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 TRIM36Q9NQ86 728 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 C1orf123Q9NWV4 160 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 OAZ3Q9UMX2 235 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 LRP12Q9Y561 859 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 AUP1Q9Y679 476 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 TMEM14AQ9Y6G1 99 aa13.48□□□□□ -0.25
COL7A1-203ENST00000459756 A6NLC8 198 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 ZAR1LA6NP61 321 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 GRPP07492 148 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 GNALP38405 381 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 PITPNBP48739 271 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 HCCSP53701 268 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 EFNB1P98172 346 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 OR8B8Q15620 311 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 C12orf73Q69YU5 71 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 USP43Q70EL4 1123 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 ASB17Q8WXJ9 295 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 CNN2Q99439 309 aaKnown RBP13.47□□□□□ -0.25
COL7A1-203ENST00000459756 MRI1Q9BV20 369 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 MROQ9BYG7 248 aa13.47□□□□□ -0.25
COL7A1-203ENST00000459756 H2AFY2Q9P0M6 372 aaPredicted RBP13.47□□□□□ -0.25
COL7A1-203ENST00000459756 ACOD1A6NK06 481 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 SLC22A31A6NKX4 558 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 LGALS8O00214 317 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 ZNF254O75437 659 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 MRPL3P09001 348 aaKnown RBP13.46□□□□□ -0.25
COL7A1-203ENST00000459756 EPHA2P29317 976 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 DCTDP32321 178 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 PSMB10P40306 273 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 PAX2Q02962 417 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 ROM1Q03395 351 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 NXNL2Q5VZ03 156 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 MEPCEQ7L2J0 689 aaKnown RBP13.46□□□□□ -0.25
COL7A1-203ENST00000459756 BPIFB2Q8N4F0 458 aa13.46□□□□□ -0.25
COL7A1-203ENST00000459756 TCEANCQ8N8B7 351 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms