RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 OR52N4Q8NGI2 321 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 ITFG2Q969R8 447 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 SORCS2Q96PQ0 1159 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 CGGBP1Q9UFW8 167 aaPredicted RBP21.15■□□□□ 0.98
U2AF1-204ENST00000459639 MAP1BP46821 2468 aaKnown RBP21.15■□□□□ 0.98
U2AF1-204ENST00000459639 A0A0G2JNJ9 132 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 A0A1W2PR80 420 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 J3QW42 95 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 ALDOBP05062 364 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 ACKR3P25106 362 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 GSK3AP49840 483 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 FAM3AP98173 230 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 GDPD1Q8N9F7 314 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 OR4M1Q8NGD0 313 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 SLC25A28Q96A46 364 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 UQCC2Q9BRT2 126 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 PPP1R3EQ9H7J1 279 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 ZNF629Q9UEG4 869 aaPredicted RBP21.15■□□□□ 0.98
U2AF1-204ENST00000459639 Q9UFV3 132 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 AMDHD2Q9Y303 409 aa21.15■□□□□ 0.98
U2AF1-204ENST00000459639 OR5H1A6NKK0 313 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 ERVH48-1M5A8F1 160 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 IDH3GP51553 393 aaPredicted RBP21.14■□□□□ 0.97
U2AF1-204ENST00000459639 CAPZA1P52907 286 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 IFITM3Q01628 133 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 MALLQ13021 153 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 TNK1Q13470 666 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 IL18Q14116 193 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 P2RY14Q15391 338 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 ST6GALNAC3Q8NDV1 305 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 FAM3DQ96BQ1 224 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 SLC25A38Q96DW6 304 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 OPA3Q9H6K4 179 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 RHBDD3Q9Y3P4 386 aa21.14■□□□□ 0.97
U2AF1-204ENST00000459639 IGKV3-15P01624 115 aa21.13■□□□□ 0.97
U2AF1-204ENST00000459639 MRPL49Q13405 166 aaKnown RBP21.13■□□□□ 0.97
U2AF1-204ENST00000459639 ZBTB37Q5TC79 503 aa21.13■□□□□ 0.97
U2AF1-204ENST00000459639 MRGPRGQ86SM5 289 aa21.13■□□□□ 0.97
U2AF1-204ENST00000459639 SNX29P2Q8IUI4 249 aa21.13■□□□□ 0.97
U2AF1-204ENST00000459639 PAQR4Q8N4S7 273 aaPredicted RBP21.13■□□□□ 0.97
U2AF1-204ENST00000459639 OR51D1Q8NGF3 324 aa21.13■□□□□ 0.97
U2AF1-204ENST00000459639 RAB40AQ8WXH6 277 aa21.13■□□□□ 0.97
U2AF1-204ENST00000459639 ABCG5Q9H222 651 aa21.13■□□□□ 0.97
U2AF1-204ENST00000459639 TBCCD1Q9NVR7 557 aa21.13■□□□□ 0.97
U2AF1-204ENST00000459639 SH3BGRL2Q9UJC5 107 aa21.13■□□□□ 0.97
U2AF1-204ENST00000459639 IGKV1-9A0A0C4DH69 117 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 LOC100289279A0A1B0GTE1 492 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 MAGEB3O15480 346 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 ICMTO60725 284 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 CELA3BP08861 270 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 PRF1P14222 555 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 PSMB1P20618 241 aaKnown RBP21.12■□□□□ 0.97
U2AF1-204ENST00000459639 IL32P24001 234 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 AZGP1P25311 298 aaKnown RBP21.12■□□□□ 0.97
U2AF1-204ENST00000459639 WNT5AP41221 380 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 RANBP1P43487 201 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 BAIAP2L2Q6UXY1 529 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 MYPOPQ86VE0 399 aaPredicted RBP21.12■□□□□ 0.97
U2AF1-204ENST00000459639 REPIN1Q9BWE0 567 aaKnown RBP21.12■□□□□ 0.97
U2AF1-204ENST00000459639 CDH20Q9HBT6 801 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 ABCB10Q9NRK6 738 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 A8MXE2 369 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 BMP5P22003 454 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 ZNF93P35789 620 aaPredicted RBP21.12■□□□□ 0.97
U2AF1-204ENST00000459639 NR4A2P43354 598 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 POU3F4P49335 361 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 ART1P52961 327 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 CASP6P55212 293 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 PYDC2Q56P42 97 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 CMTM4Q8IZR5 234 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 FAM169BQ8N8A8 192 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 OR5L1Q8NGL2 311 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 SSC4DQ8WTU2 575 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 VKORC1Q9BQB6 163 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 CNTD2Q9H8S5 307 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 MOV10Q9HCE1 1003 aaKnown RBP21.12■□□□□ 0.97
U2AF1-204ENST00000459639 RABL2AQ9UBK7 228 aaPredicted RBP21.12■□□□□ 0.97
U2AF1-204ENST00000459639 RABL2BQ9UNT1 228 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 SHANK1Q9Y566 2161 aa21.12■□□□□ 0.97
U2AF1-204ENST00000459639 HCKP08631 526 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 OCMP0CE72 109 aaPredicted RBP21.11■□□□□ 0.97
U2AF1-204ENST00000459639 LY6DQ14210 128 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 GK2Q14410 553 aaPredicted RBP21.11■□□□□ 0.97
U2AF1-204ENST00000459639 UBE2V2Q15819 145 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 C2orf76Q3KRA6 126 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 TMEM42Q69YG0 159 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 TMEM211Q6ICI0 200 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 MRPL21Q7Z2W9 205 aaKnown RBP21.11■□□□□ 0.97
U2AF1-204ENST00000459639 LYSMD2Q8IV50 215 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 OR4D6Q8NGJ1 314 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 SYNPRQ8TBG9 265 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 NKX3-1Q99801 234 aaPredicted RBP21.11■□□□□ 0.97
U2AF1-204ENST00000459639 RHBDL2Q9NX52 303 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 STARD10Q9Y365 291 aa21.11■□□□□ 0.97
U2AF1-204ENST00000459639 ISPDA4D126 451 aa21.1■□□□□ 0.97
U2AF1-204ENST00000459639 NGFP01138 241 aa21.1■□□□□ 0.97
U2AF1-204ENST00000459639 PITPNBP48739 271 aa21.1■□□□□ 0.97
U2AF1-204ENST00000459639 TIMM23BQ5SRD1 257 aa21.1■□□□□ 0.97
U2AF1-204ENST00000459639 CLVS2Q5SYC1 327 aa21.1■□□□□ 0.97
U2AF1-204ENST00000459639 C1QTNF12Q5T7M4 302 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms