RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 OR52D1Q9H346 318 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 DPAGT1Q9H3H5 408 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 CNTD2Q9H8S5 307 aa9.75□□□□□ -0.85
LMCD1-206ENST00000456506 NOP16Q9Y3C1 178 aaKnown RBP9.75□□□□□ -0.85
LMCD1-206ENST00000456506 GRPP07492 148 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 EGR3Q06889 387 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 SLC36A3Q495N2 470 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 FGD3Q5JSP0 725 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 WDR38Q5JTN6 314 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 SLC35E4Q6ICL7 350 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 CRIP3Q6Q6R5 217 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 LYPD4Q6UWN0 246 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 DRAM2Q6UX65 266 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 PNKDQ8N490 385 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 FAM216BQ8N7L0 139 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 SDR9C7Q8NEX9 313 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 RP9Q8TA86 221 aaKnown RBP9.74□□□□□ -0.85
LMCD1-206ENST00000456506 C8orf46Q8TAG6 207 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 FANK1Q8TC84 345 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 NPRL2Q8WTW4 380 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 LRTOMTQ8WZ04 291 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 ST8SIA4Q92187 359 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 CFHR4Q92496 578 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 SEH1LQ96EE3 360 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 NSL1Q96IY1 281 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 PPP1R3EQ9H7J1 279 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 ARL8BQ9NVJ2 186 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 ABCD2Q9UBJ2 740 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 FBLN5Q9UBX5 448 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 CAPN7Q9Y6W3 813 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 NBEAL2Q6ZNJ1 2754 aa9.74□□□□□ -0.85
LMCD1-206ENST00000456506 NPFFO15130 113 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 RENP00797 406 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 FBP1P09467 338 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 CSF1P09603 554 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 CALB2P22676 271 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 SLC6A6P31641 620 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 TGFBR2P37173 567 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 GSSP48637 474 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 TGM4P49221 684 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 MNAT1P51948 309 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 EFNB2P52799 333 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 KLRD1Q13241 179 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 KLHL12Q53G59 568 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 DHRS7BQ6IAN0 325 aaPredicted RBP9.73□□□□□ -0.85
LMCD1-206ENST00000456506 HCP5Q6MZN7 132 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 WDR82Q6UXN9 313 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 PRSS45Q7RTY3 260 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 SPERTQ8NA61 448 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 OR56B2PQ8NGI1 322 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 OR2AJ1Q8NGZ0 328 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 OR52J3Q8NH60 311 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 PPP1R35Q8TAP8 253 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 SPTSSAQ969W0 71 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 CMTM5Q96DZ9 223 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 CCL13Q99616 98 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 TLNRD1Q9H1K6 362 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 C1orf21Q9H246 121 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 RNPEPL1Q9HAU8 725 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 SIRT7Q9NRC8 400 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 DCAF13Q9NV06 445 aaKnown RBP9.73□□□□□ -0.85
LMCD1-206ENST00000456506 TAGLN3Q9UI15 199 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 KCNG2Q9UJ96 466 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 PRPF19Q9UMS4 504 aaKnown RBP9.73□□□□□ -0.85
LMCD1-206ENST00000456506 AURKCQ9UQB9 309 aa9.73□□□□□ -0.85
LMCD1-206ENST00000456506 GGT3PA6NGU5 568 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 BHLHE40O14503 412 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 ACOT8O14734 319 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 PRB2P02812 416 aaPredicted RBP9.72□□□□□ -0.85
LMCD1-206ENST00000456506 OPN1MWP04001 364 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 OPN1MW2P0DN77 364 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 OPN1MW3P0DN78 364 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 SELLP14151 372 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 MUC1P15941 1255 aaPredicted RBP9.72□□□□□ -0.85
LMCD1-206ENST00000456506 NOS3P29474 1203 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 PYCR1P32322 319 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 RASSF2P50749 326 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 CSNK2BP67870 215 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 FAM3AP98173 230 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 ATPAF1Q5TC12 328 aaPredicted RBP9.72□□□□□ -0.85
LMCD1-206ENST00000456506 STUMQ69YW2 141 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 HACD2Q6Y1H2 254 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 ASRGL1Q7L266 308 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 ZDHHC21Q8IVQ6 265 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 LRRC29Q8WV35 223 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 FAM162AQ96A26 154 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 SLC7A6OSQ96CW6 309 aaPredicted RBP9.72□□□□□ -0.85
LMCD1-206ENST00000456506 HOPXQ9BPY8 73 aaPredicted RBP9.72□□□□□ -0.85
LMCD1-206ENST00000456506 DCTN5Q9BTE1 182 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 COMMD3-BMI1R4GMX3 469 aa9.72□□□□□ -0.85
LMCD1-206ENST00000456506 TVP23AA6NH52 213 aa9.71□□□□□ -0.86
LMCD1-206ENST00000456506 A6NLC8 198 aa9.71□□□□□ -0.86
LMCD1-206ENST00000456506 GSTA4O15217 222 aa9.71□□□□□ -0.86
LMCD1-206ENST00000456506 GPR37O15354 613 aa9.71□□□□□ -0.86
LMCD1-206ENST00000456506 IDH3BO43837 385 aa9.71□□□□□ -0.86
LMCD1-206ENST00000456506 SLC2A1P11166 492 aa9.71□□□□□ -0.86
LMCD1-206ENST00000456506 COX4I1P13073 169 aa9.71□□□□□ -0.86
LMCD1-206ENST00000456506 SAA4P35542 130 aa9.71□□□□□ -0.86
LMCD1-206ENST00000456506 MXRA7P84157 204 aa9.71□□□□□ -0.86
LMCD1-206ENST00000456506 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms