RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SLC25A30Q5SVS4 291 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 ZNF322Q6U7Q0 402 aaPredicted RBP14.59□□□□□ -0.07
USP39-208ENST00000455732 MOGAT3Q86VF5 341 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 GLCCI1Q86VQ1 547 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 LRRC28Q86X40 367 aaPredicted RBP14.59□□□□□ -0.07
USP39-208ENST00000455732 SPICQ8N5J4 248 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 RFLNBQ8N5W9 214 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 OR51F2Q8NH61 342 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 STMN2Q93045 179 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 ITFG2Q969R8 447 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 MBOAT4Q96T53 435 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 BRD7Q9NPI1 651 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 FAM206AQ9NX38 181 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 IMPAD1Q9NX62 359 aa14.59□□□□□ -0.07
USP39-208ENST00000455732 A0A0U1RQV5 110 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 ISPDA4D126 451 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 LRRC30A6NM36 301 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 ANKRD30BLA7E2S9 258 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 HNF1AP20823 631 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 THBS2P35442 1172 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 GSK3AP49840 483 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 RIDAP52758 137 aaKnown RBP14.58□□□□□ -0.08
USP39-208ENST00000455732 CXCR4P61073 352 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 SNRPGP62308 76 aaKnown RBP14.58□□□□□ -0.08
USP39-208ENST00000455732 EGR3Q06889 387 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 MZT1Q08AG7 82 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 ZMYND11Q15326 602 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 ZSCAN26Q16670 478 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 ZNF829Q3KNS6 432 aaPredicted RBP14.58□□□□□ -0.08
USP39-208ENST00000455732 ZBTB49Q6ZSB9 765 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 C1orf87Q8N0U7 546 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 FTMTQ8N4E7 242 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 CSNK2A3Q8NEV1 391 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 OR8B12Q8NGG6 310 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 OR51G2Q8NGK0 314 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 ZNF420Q8TAQ5 688 aaPredicted RBP14.58□□□□□ -0.08
USP39-208ENST00000455732 EME1Q96AY2 570 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 TMEM186Q96B77 213 aa14.58□□□□□ -0.08
USP39-208ENST00000455732 TRAV20A0A0B4J274 112 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.57□□□□□ -0.08
USP39-208ENST00000455732 TMEM269A0A1B0GVZ9 245 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 ZNF670-ZNF695F2Z2N8 137 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 PSMD9O00233 223 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 MDH2P40926 338 aaKnown RBP14.57□□□□□ -0.08
USP39-208ENST00000455732 PMELP40967 661 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 GFOD2Q3B7J2 385 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 ZIK1Q3SY52 487 aaPredicted RBP14.57□□□□□ -0.08
USP39-208ENST00000455732 MUC20Q8N307 709 aaPredicted RBP14.57□□□□□ -0.08
USP39-208ENST00000455732 LYZL4Q96KX0 146 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 SLC29A1Q99808 456 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 MOB1AQ9H8S9 216 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 NUFIP1Q9UHK0 495 aaKnown RBP14.57□□□□□ -0.08
USP39-208ENST00000455732 IKZF2Q9UKS7 526 aa14.57□□□□□ -0.08
USP39-208ENST00000455732 SRSF10O75494 262 aaKnown RBP14.56□□□□□ -0.08
USP39-208ENST00000455732 CYB5R3P00387 301 aaPredicted RBP14.56□□□□□ -0.08
USP39-208ENST00000455732 IGLV3-1P01715 115 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 OR2T7P0C7T2 308 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 CPT2P23786 658 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 RBMXP38159 391 aaKnown RBP14.56□□□□□ -0.08
USP39-208ENST00000455732 OCLNQ16625 522 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 PRAMEF6Q5VXH4 476 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 MEDAGQ5VYS4 303 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 KRT74Q7RTS7 529 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 KLHL36Q8N4N3 616 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 OR11L1Q8NGX0 322 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 OR2T27Q8NH04 317 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 DVL3Q92997 716 aaPredicted RBP14.56□□□□□ -0.08
USP39-208ENST00000455732 RDH12Q96NR8 316 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 FN3KRPQ9HA64 309 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 PATZ1Q9HBE1 687 aaKnown RBP14.56□□□□□ -0.08
USP39-208ENST00000455732 LPAR2Q9HBW0 351 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 ABCB9Q9NP78 766 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 C14orf119Q9NWQ9 140 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 HIF1ANQ9NWT6 349 aa14.56□□□□□ -0.08
USP39-208ENST00000455732 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.56□□□□□ -0.08
USP39-208ENST00000455732 IGHV3-64DA0A0J9YX35 117 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 F5H0A9 414 aaPredicted RBP14.55□□□□□ -0.08
USP39-208ENST00000455732 FAM20BO75063 409 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 BAG2O95816 211 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 CST4P01036 141 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 IRF2P14316 349 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 ATP6V1B1P15313 513 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 ACKR3P25106 362 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 MPPED2Q15777 294 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 TMEM158Q8WZ71 300 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 UBE2FQ969M7 185 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 APOL4Q9BPW4 351 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 TTTY10Q9BZA0 68 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 PBOV1Q9GZY1 135 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 UBAP1Q9NZ09 502 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 MRM2Q9UI43 246 aaKnown RBP14.55□□□□□ -0.08
USP39-208ENST00000455732 RHBDD3Q9Y3P4 386 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 GMPPBQ9Y5P6 360 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 R4GMQ9 66 aa14.55□□□□□ -0.08
USP39-208ENST00000455732 A0A1W2PQL4 384 aaPredicted RBP14.54□□□□□ -0.08
USP39-208ENST00000455732 PHF1O43189 567 aaPredicted RBP14.54□□□□□ -0.08
USP39-208ENST00000455732 PLPP2O43688 288 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 ENTPD6O75354 484 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 GABRB1P18505 474 aa14.54□□□□□ -0.08
USP39-208ENST00000455732 GNALP38405 381 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms