RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SPTSSAQ969W0 71 aa18.93■□□□□ 0.62
PTPRA-208ENST00000455631 SEH1LQ96EE3 360 aa18.93■□□□□ 0.62
PTPRA-208ENST00000455631 RSRC1Q96IZ7 334 aaKnown RBP18.93■□□□□ 0.62
PTPRA-208ENST00000455631 TXNDC12O95881 172 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 HLA-DQA2P01906 255 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 SELLP14151 372 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 SLC36A3Q495N2 470 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 PGBD2Q6P3X8 592 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 NDUFA11Q86Y39 141 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 C8orf46Q8TAG6 207 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 STON2Q8WXE9 905 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 NKX3-1Q99801 234 aaPredicted RBP18.92■□□□□ 0.62
PTPRA-208ENST00000455631 TMEM120AQ9BXJ8 343 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 METTL8Q9H825 291 aaKnown RBP18.92■□□□□ 0.62
PTPRA-208ENST00000455631 RNPEPL1Q9HAU8 725 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 CYB5R1Q9UHQ9 305 aa18.92■□□□□ 0.62
PTPRA-208ENST00000455631 K7EIL1 84 aa18.91■□□□□ 0.62
PTPRA-208ENST00000455631 FXYD6P3P58550 94 aa18.91■□□□□ 0.62
PTPRA-208ENST00000455631 CSNK2BP67870 215 aa18.91■□□□□ 0.62
PTPRA-208ENST00000455631 WDR86Q86TI4 376 aa18.91■□□□□ 0.62
PTPRA-208ENST00000455631 MAP6Q96JE9 813 aa18.91■□□□□ 0.62
PTPRA-208ENST00000455631 NMNAT3Q96T66 252 aa18.91■□□□□ 0.62
PTPRA-208ENST00000455631 A0A1W2PQ09 198 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.9■□□□□ 0.62
PTPRA-208ENST00000455631 MRASO14807 208 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 CHST1O43916 411 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 ZNF682O95780 498 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 RENP00797 406 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 TROVE2P10155 538 aaKnown RBP eCLIP18.9■□□□□ 0.62
PTPRA-208ENST00000455631 IGLL1P15814 213 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 IFI44LQ53G44 452 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 CRIP3Q6Q6R5 217 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 DPY19L4Q7Z388 723 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 C11orf53Q8IXP5 236 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 DYDC1Q8WWB3 177 aa18.9■□□□□ 0.62
PTPRA-208ENST00000455631 C12orf43Q96C57 262 aaKnown RBP18.9■□□□□ 0.62
PTPRA-208ENST00000455631 ERMAPQ96PL5 475 aaPredicted RBP18.9■□□□□ 0.62
PTPRA-208ENST00000455631 RPRD1BQ9NQG5 326 aaKnown RBP18.9■□□□□ 0.62
PTPRA-208ENST00000455631 ANKRD30BLA7E2S9 258 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 M0R1W7 72 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 AMY2BP19961 511 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 CD33P20138 364 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 PAX6P26367 422 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 BLMHQ13867 455 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 HABP2Q14520 560 aaPredicted RBP18.89■□□□□ 0.61
PTPRA-208ENST00000455631 CCBE1Q6UXH8 406 aaPredicted RBP18.89■□□□□ 0.61
PTPRA-208ENST00000455631 WDR82Q6UXN9 313 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 DTX3Q8N9I9 347 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 OR5T2Q8NGG2 359 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 CITED2Q99967 270 aaPredicted RBP18.89■□□□□ 0.61
PTPRA-208ENST00000455631 NSRP1Q9H0G5 558 aaKnown RBP18.89■□□□□ 0.61
PTPRA-208ENST00000455631 ANKRD19PQ9H560 264 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 SF3B6Q9Y3B4 125 aaKnown RBP18.89■□□□□ 0.61
PTPRA-208ENST00000455631 N6AMT1Q9Y5N5 214 aa18.89■□□□□ 0.61
PTPRA-208ENST00000455631 COL7A1Q02388 2944 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 NKX6-3A6NJ46 265 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 ANGPTL7O43827 346 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 TGM4P49221 684 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 GMFBP60983 142 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 STUMQ69YW2 141 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 FKBP9P1Q75LS8 142 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 CYP4Z1Q86W10 505 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 OR1M1Q8NGA1 313 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 OR9Q1Q8NGQ5 310 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 WWC2-AS2Q96NR7 200 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 FN3KQ9H479 309 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 CAPN7Q9Y6W3 813 aa18.88■□□□□ 0.61
PTPRA-208ENST00000455631 UNC119BA6NIH7 251 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 ADARB2-AS1A8MUL3 147 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 SLC2A1P11166 492 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 NAA10P41227 235 aaPredicted RBP18.87■□□□□ 0.61
PTPRA-208ENST00000455631 RPS27P42677 84 aaKnown RBP18.87■□□□□ 0.61
PTPRA-208ENST00000455631 OMPP47874 163 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 BMXP51813 675 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 DEFB121Q5J5C9 76 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 FGD3Q5JSP0 725 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 SMARCD3Q6STE5 483 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 DRAM2Q6UX65 266 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 LIAT1Q6ZQX7 453 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 OR4K13Q8NH42 304 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 OPA3Q9H6K4 179 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 ZNF702PQ9H963 129 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 SNTG1Q9NSN8 517 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 SERTAD4Q9NUC0 356 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 SLC25A10Q9UBX3 287 aaPredicted RBP18.87■□□□□ 0.61
PTPRA-208ENST00000455631 ZNF391Q9UJN7 358 aa18.87■□□□□ 0.61
PTPRA-208ENST00000455631 NPPAP01160 153 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 NDUFB7P17568 137 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 POU1F1P28069 291 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 GSK3BP49841 420 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 AANATQ16613 207 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 COQ5Q5HYK3 327 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 HCP5Q6MZN7 132 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 ZBTB46Q86UZ6 589 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 FANK1Q8TC84 345 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 DUS3LQ96G46 650 aaKnown RBP18.86■□□□□ 0.61
PTPRA-208ENST00000455631 HSH2DQ96JZ2 352 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 MEGF9Q9H1U4 602 aa18.86■□□□□ 0.61
PTPRA-208ENST00000455631 MRPL22Q9NWU5 206 aaKnown RBP18.86■□□□□ 0.61
PTPRA-208ENST00000455631 A0A0G2JND7 137 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms