RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 WDFY2Q96P53 400 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 COPS4Q9BT78 406 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 CENPMQ9NSP4 180 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 TBC1D23Q9NUY8 699 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 N6AMT1Q9Y5N5 214 aa13.24□□□□□ -0.29
GPC1-206ENST00000455111 A0A0U1RQK1 487 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 FAM183AA6NL82 134 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 P2RY10O00398 339 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 KRT36O76013 467 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 TOX4O94842 621 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 CCNB2O95067 398 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 SELLP14151 372 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 NPY4RP50391 375 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 ARF6P62330 175 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 OR8B8Q15620 311 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 WDR82Q6UXN9 313 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 BTN2A1Q7KYR7 527 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 IQCF1Q8N6M8 205 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 LY6G5BQ8NDX9 201 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 OR52L1Q8NGH7 329 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 SLC22A4Q9H015 551 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 SEMA6AQ9H2E6 1030 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 ACTR3BQ9P1U1 418 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 ERVK-18Q9QC07 812 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 KAAG1Q9UBP8 84 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 U3KQV3 271 aa13.23□□□□□ -0.29
GPC1-206ENST00000455111 IGHV1-69DA0A0B4J2H0 117 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 ZNF878C9JN71 531 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 IGHV1-69P01742 117 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 IGHV4-59P01825 116 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 FMO3P31513 532 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 CX3CR1P49238 355 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 WDR38Q5JTN6 314 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 GPR157Q5UAW9 335 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 RPL13AP3Q6NVV1 102 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 PDZD9Q8IXQ8 264 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 TIGD4Q8IY51 512 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 FAM216BQ8N7L0 139 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 OR1M1Q8NGA1 313 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 RNF133Q8WVZ7 376 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 LHX4Q969G2 390 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 CCL13Q99616 98 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 CITED1Q99966 193 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 ABHD6Q9BV23 337 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 DGCR6LQ9BY27 220 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 TAS2R1Q9NYW7 299 aa13.22□□□□□ -0.29
GPC1-206ENST00000455111 ACOT8O14734 319 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 T-ENOLP0DO92 83 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 ACKR3P25106 362 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 RAG2P55895 527 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 EIF2B1Q14232 305 aaKnown RBP13.21□□□□□ -0.29
GPC1-206ENST00000455111 MICAQ29983 383 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 LCN8Q6JVE9 175 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 DPY19L4Q7Z388 723 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 Q8N7P7 452 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 OR6K6Q8NGW6 343 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 LRRC29Q8WV35 223 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 ZDHHC16Q969W1 377 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 REEP6Q96HR9 211 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 LYZL4Q96KX0 146 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 TLNRD1Q9H1K6 362 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 NOX4Q9NPH5 578 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 CMC2Q9NRP2 79 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 ACOXLQ9NUZ1 547 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 RPUSD1Q9UJJ7 312 aaKnown RBP13.21□□□□□ -0.29
GPC1-206ENST00000455111 KLHDC2Q9Y2U9 406 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 RHBDD3Q9Y3P4 386 aa13.21□□□□□ -0.29
GPC1-206ENST00000455111 TRAV38-1A0A0B4J264 116 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 A6NLC8 198 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 TBX1O43435 398 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 XRCC2O43543 280 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 NDUFA7O95182 113 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 OPRL1P41146 370 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 ZNF121P58317 390 aaPredicted RBP13.2□□□□□ -0.3
GPC1-206ENST00000455111 DEFA6Q01524 100 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 CD276Q5ZPR3 534 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 OR2T5Q6IEZ7 315 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 C16orf89Q6UX73 402 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 VMO1Q7Z5L0 202 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 CPLX4Q7Z7G2 160 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 OR2T33Q8NG76 320 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 OR2T29Q8NH02 315 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 ITPKCQ96DU7 683 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 WDR13Q9H1Z4 485 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 DNAJC27Q9NZQ0 273 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 ARL2BPQ9Y2Y0 163 aa13.2□□□□□ -0.3
GPC1-206ENST00000455111 hCG_1807616A0A1W2PRN6 198 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 MEGF11A6BM72 1044 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 CDIPTO14735 213 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 IER3P46695 156 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 TGM4P49221 684 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 GSK3AP49840 483 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 BPIFB3P59826 476 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 GNGT1P63211 74 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 TAF9Q16594 264 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 SPATS1Q496A3 300 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 OLFML2AQ68BL7 652 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 STUMQ69YW2 141 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 CD300LDQ6UXZ3 194 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 FAM57BQ71RH2 274 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms