RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ZNF716A6NP11 495 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 HSPB2A8KAH6 182 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 H7C417 338 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 GLCEO94923 617 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 H2AFB1P0C5Y9 115 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 CLUP10909 449 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 MGMTP16455 207 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 KLRB1Q12918 225 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 HSPB2Q16082 182 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 ETFDHQ16134 617 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 ZNF660Q6AZW8 331 aaPredicted RBP13.97□□□□□ -0.17
SNX17-204ENST00000453453 UQCC3Q6UW78 93 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 NHLRC1Q6VVB1 395 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 GLB1L2Q8IW92 636 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 IZUMO1Q8IYV9 350 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 CISD2Q8N5K1 135 aaKnown RBP13.97□□□□□ -0.17
SNX17-204ENST00000453453 Q8NA96 180 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 FNDC9Q8TBE3 224 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 MRPS24Q96EL2 167 aaKnown RBP13.97□□□□□ -0.17
SNX17-204ENST00000453453 PHYHIPLQ96FC7 376 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 SLC25A18Q9H1K4 315 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 MTFP1Q9UDX5 166 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 OR5V1Q9UGF6 321 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 FLVCR1Q9Y5Y0 555 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 RFPL4AA6NLU0 287 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 RFPL4AL1F8VTS6 287 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 DNASE2O00115 360 aaPredicted RBP13.97□□□□□ -0.17
SNX17-204ENST00000453453 PIN1P1O15428 100 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 SLC16A7O60669 478 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 MPGP29372 298 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 THEM4Q5T1C6 240 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 CARD17Q5XLA6 110 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 LRFN4Q6PJG9 635 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 ALKAL2Q6UX46 152 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 PXT1Q8NFP0 134 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 ABHD3Q8WU67 409 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 CCDC107Q8WV48 283 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 INTS12Q96CB8 462 aaKnown RBP13.97□□□□□ -0.17
SNX17-204ENST00000453453 C1orf198Q9H425 327 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 SLC17A5Q9NRA2 495 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 UPB1Q9UBR1 384 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 IGKV3D-15A0A087WSY6 115 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 AHRRA9YTQ3 701 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 ARPC5O15511 151 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 XRCC3O43542 346 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 RBBP9O75884 186 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 TACSTD2P09758 323 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 PGA4P0DJD7 388 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 PGA3P0DJD8 388 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 ANXA7P20073 488 aaKnown RBP13.96□□□□□ -0.17
SNX17-204ENST00000453453 CSNK1A1P48729 337 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 S100A12P80511 92 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 SRSF4Q08170 494 aaKnown RBP13.96□□□□□ -0.17
SNX17-204ENST00000453453 FGL1Q08830 312 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 PABPC1L2AQ5JQF8 200 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 HES5Q5TA89 166 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 LPCAT3Q6P1A2 487 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 AAED1Q7RTV5 226 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 OR51L1Q8NGJ5 315 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 TMEM45BQ96B21 275 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 ZMYND19Q96E35 227 aaPredicted RBP13.96□□□□□ -0.17
SNX17-204ENST00000453453 TSSK2Q96PF2 358 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 ZNF385AQ96PM9 386 aaKnown RBP13.96□□□□□ -0.17
SNX17-204ENST00000453453 GINS4Q9BRT9 223 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 RNF122Q9H9V4 155 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 PARPBPQ9NWS1 579 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 NDRG3Q9UGV2 375 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 GNG8Q9UK08 70 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 B9D1Q9UPM9 204 aa13.96□□□□□ -0.17
SNX17-204ENST00000453453 LOC400499M0QZD8 3231 aa13.96□□□□□ -0.18
SNX17-204ENST00000453453 MGAQ8IWI9 3026 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 TRBV5-5A0A0J9YX44 114 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 TTLL8A6PVC2 850 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 ZNF724A8MTY0 619 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 TEX46H3BTG2 121 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 VSIG10L2P0DP72 767 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 CDK2P24941 298 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 ZNF345Q14585 488 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 SFRP5Q5T4F7 317 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 SHEQ5VZ18 495 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 ZNF324BQ6AW86 544 aaPredicted RBP13.95□□□□□ -0.18
SNX17-204ENST00000453453 TRIB1Q96RU8 372 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 MNTQ99583 582 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 MRPL13Q9BYD1 178 aaKnown RBP13.95□□□□□ -0.18
SNX17-204ENST00000453453 GP6Q9HCN6 339 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 RASL12Q9NYN1 266 aa13.95□□□□□ -0.18
SNX17-204ENST00000453453 MRPL15Q9P015 296 aaKnown RBP13.95□□□□□ -0.18
SNX17-204ENST00000453453 NOSIPQ9Y314 301 aaKnown RBP13.95□□□□□ -0.18
SNX17-204ENST00000453453 ACOD1A6NK06 481 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 PYCARD-AS1I3L0S3 204 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 HLA-DQA2P01906 255 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 AKAIN1P0CW23 69 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 ZNF35P13682 527 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 CTLA4P16410 223 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 B2MP61769 119 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 GLO1Q04760 184 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 Q499Y3 187 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 ZNF684Q5T5D7 378 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 SYT9Q86SS6 491 aa13.94□□□□□ -0.18
SNX17-204ENST00000453453 ZIC4Q8N9L1 334 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms