RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 RIBC2Q9H4K1 309 aa13.51□□□□□ -0.25
SCAMP4-205ENST00000452128 CLN6Q9NWW5 311 aa13.51□□□□□ -0.25
SCAMP4-205ENST00000452128 WARS2Q9UGM6 360 aaKnown RBP13.51□□□□□ -0.25
SCAMP4-205ENST00000452128 RHBDD3Q9Y3P4 386 aa13.51□□□□□ -0.25
SCAMP4-205ENST00000452128 N6AMT1Q9Y5N5 214 aa13.51□□□□□ -0.25
SCAMP4-205ENST00000452128 TMEM14AQ9Y6G1 99 aa13.51□□□□□ -0.25
SCAMP4-205ENST00000452128 WNK2Q9Y3S1 2297 aa13.51□□□□□ -0.25
SCAMP4-205ENST00000452128 PPIAL4EA0A075B759 164 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 PPIAL4CA0A0B4J2A2 164 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 A0A0U1RQV5 110 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 PPIAL4DF5H284 164 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 J3QRE1 110 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 PSMD9O00233 223 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 DLGAP1O14490 977 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 MAGEB4O15481 346 aaPredicted RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 TBX1O43435 398 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 FAM20BO75063 409 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 CYB5R3P00387 301 aaPredicted RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 LHBP01229 141 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 PPIAL4FP0DN26 164 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 ANPEPP15144 967 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 GABRB1P18505 474 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 CFL1P23528 166 aaKnown RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 CPT2P23786 658 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 MDH2P40926 338 aaKnown RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 SNRPGP62308 76 aaKnown RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 HOXA4Q00056 320 aaPredicted RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 PAX2Q02962 417 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 OR8G1Q15617 311 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 FAM76BQ5HYJ3 339 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 PRAMEF6Q5VXH4 476 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 IL17RELQ6ZVW7 336 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 SSX6Q7RTT6 188 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 PEG10Q86TG7 708 aaKnown RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 GID4Q8IVV7 300 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 PQLC1Q8N2U9 271 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 SPERTQ8NA61 448 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 OR51F2Q8NH61 342 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 DACT3Q96B18 629 aaPredicted RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 PGAM5Q96HS1 289 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 CNN2Q99439 309 aaKnown RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 GAL3ST1Q99999 423 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 APOL4Q9BPW4 351 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 BRD7Q9NPI1 651 aa13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 MRM2Q9UI43 246 aaKnown RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 NOP16Q9Y3C1 178 aaKnown RBP13.5□□□□□ -0.25
SCAMP4-205ENST00000452128 A8MXK9 166 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 CST4P01036 141 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 CFHR2P36980 270 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 TMED1Q13445 227 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 TIGD6Q17RP2 521 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 ZNF404Q494X3 552 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 KCTD18Q6PI47 426 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 ZNF322Q6U7Q0 402 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 KRT77Q7Z794 578 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 GLCCI1Q86VQ1 547 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 SLC35F2Q8IXU6 374 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 DVL3Q92997 716 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 ITFG2Q969R8 447 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 RAB3IPQ96QF0 476 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 MDFIQ99750 246 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 TMEM246Q9BRR3 403 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 ADAT1Q9BUB4 502 aaKnown RBP13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 TMPRSS13Q9BYE2 586 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 TLNRD1Q9H1K6 362 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 LPAR2Q9HBW0 351 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 H2AFY2Q9P0M6 372 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 OPN4Q9UHM6 478 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 ZNF391Q9UJN7 358 aa13.49□□□□□ -0.25
SCAMP4-205ENST00000452128 TMEM269A0A1B0GVZ9 245 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 CEACAM18A8MTB9 384 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 TRAPPC2LH3BP13 241 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 ZNF205O95201 554 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 ISL1P61371 349 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 SEC61A1P61619 476 aaKnown RBP13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 MFGE8Q08431 387 aaPredicted RBP13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 OCLNQ16625 522 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 TUSC1Q2TAM9 212 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 ZIK1Q3SY52 487 aaPredicted RBP13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 SPICQ8N5J4 248 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 ITPKCQ96DU7 683 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 MROQ9BYG7 248 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 PBOV1Q9GZY1 135 aa13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 NUFIP1Q9UHK0 495 aaKnown RBP13.48□□□□□ -0.25
SCAMP4-205ENST00000452128 A0A1B0GTI1 187 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 A0A1W2PQL4 384 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 ENTPD6O75354 484 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 FSHBP01225 129 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 TTRP02766 147 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 OR2T7P0C7T2 308 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 PSMB10P40306 273 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 CXCR4P61073 352 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 EGR3Q06889 387 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 ZNF841Q6ZN19 808 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 GALNT4Q8N4A0 578 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 CSNK2A3Q8NEV1 391 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 OR51G2Q8NGK0 314 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 OR2T27Q8NH04 317 aa13.47□□□□□ -0.25
SCAMP4-205ENST00000452128 MMP26Q9NRE1 261 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms