RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	BCAS4	Q8TDM0	211 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	PLEKHA8	Q96JA3	519 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	TECTB	Q96PL2	329 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	OR8B2	Q96RD0	313 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	JMJD8	Q96S16	334 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	AMELY	Q99218	206 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	ABHD6	Q9BV23	337 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	FN3KRP	Q9HA64	309 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	ESM1	Q9NQ30	184 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	C1orf123	Q9NWV4	160 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF69	Q9UC07	566 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	MIOX	Q9UGB7	285 aa		7.25	□□□□□ -1.25
RFX3-209	ENST00000451859	IGHV3OR15-7	A0A075B7D8	119 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	PPIAL4C	A0A0B4J2A2	164 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	IGHV2-70D	A0A0C4DH43	119 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	AQP12B	A6NM10	295 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	PRR23D1	E9PI22	279 aa	Predicted RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	SELENOF	O60613	162 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	H2BFM	P0C1H6	154 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	PRR23D2	P0DMB1	279 aa	Predicted RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	IGHV4-38-2	P0DP08	117 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	OTX1	P32242	354 aa	Predicted RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	SLC15A1	P46059	708 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	BLVRA	P53004	296 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF121	P58317	390 aa	Predicted RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	RPS7	P62081	194 aa	Known RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	GRB2	P62993	217 aa	Known RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF181	Q2M3W8	571 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	DNAL1	Q4LDG9	190 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	OXLD1	Q5BKU9	147 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	KLF17	Q5JT82	389 aa	Predicted RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	TMEM236	Q5W0B7	351 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	BTNL3	Q6UXE8	466 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	RBMS3	Q6XE24	437 aa	Known RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	DCDC5	Q6ZRR9	648 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	SLC16A9	Q7RTY1	509 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	AQP12A	Q8IXF9	295 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	PARP8	Q8N3A8	854 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	ZDHHC22	Q8N966	263 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	BBS1	Q8NFJ9	593 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	POP5	Q969H6	163 aa	Known RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	REEP6	Q96HR9	211 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	PGAM5	Q96HS1	289 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	TTTY10	Q9BZA0	68 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	MS4A7	Q9GZW8	240 aa	Predicted RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	C1orf21	Q9H246	121 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF556	Q9HAH1	456 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	KIF17	Q9P2E2	1029 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	RNF7	Q9UBF6	113 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	CLN8	Q9UBY8	286 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	NUP50	Q9UKX7	468 aa		7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	NOP16	Q9Y3C1	178 aa	Known RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	SOX21	Q9Y651	276 aa	Predicted RBP	7.24	□□□□□ -1.25
RFX3-209	ENST00000451859	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	MDFIC2	A0A1B0GVS7	189 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859		A0A1B0GWJ7	208 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	ARRDC5	A6NEK1	342 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	DNAJC9-AS1	A6NH13	148 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859		A6NJY4	79 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	ANKRD30BL	A7E2S9	258 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	ADAM20	O43506	726 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	XRCC2	O43543	280 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	GMDS	O60547	372 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	FKBP6	O75344	327 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	TIPRL	O75663	272 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	GLCE	O94923	617 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	GYPA	P02724	150 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	MRPL3	P09001	348 aa	Known RBP	7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	OSM	P13725	252 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	EGR1	P18146	543 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	GMFB	P60983	142 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	UBA52	P62987	128 aa	Known RBP	7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	CSNK2B	P67870	215 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	FAM3A	P98173	230 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	PCK2	Q16822	640 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	TEX30	Q5JUR7	227 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	WDR25	Q64LD2	544 aa	Predicted RBP	7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	CD300LD	Q6UXZ3	194 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	USP43	Q70EL4	1123 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	CPO	Q8IVL8	374 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	CELF2-AS1	Q8N7Q2	184 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	C3orf56	Q8N813	242 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859		Q8TCH9	128 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	FAM216A	Q8WUB2	273 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	THEM6	Q8WUY1	208 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	RAB40A	Q8WXH6	277 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	SGK3	Q96BR1	496 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF48	Q96MX3	618 aa	Predicted RBP	7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	NUDT16L1	Q9BRJ7	211 aa	Known RBP	7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	PAPOLG	Q9BWT3	736 aa	Known RBP	7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	SLC22A4	Q9H015	551 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	OR10A2	Q9H208	303 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	RASSF4	Q9H2L5	321 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	PPP1R3E	Q9H7J1	279 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	MARCH7	Q9H992	704 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	MRPL15	Q9P015	296 aa	Known RBP	7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	POMP	Q9Y244	141 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	KLHDC2	Q9Y2U9	406 aa		7.23	□□□□□ -1.25
RFX3-209	ENST00000451859	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms