RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 THRSPQ92748 146 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF775Q96BV0 537 aaPredicted RBP10.69□□□□□ -0.7
COL27A1-202ENST00000451716 IMMP1LQ96LU5 166 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 GINS4Q9BRT9 223 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF436Q9C0F3 470 aaPredicted RBP10.69□□□□□ -0.7
COL27A1-202ENST00000451716 WDR54Q9H977 334 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 LOC102723996A0A087X1L8 192 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 TP53I11O14683 189 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 SYT7O43581 403 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 HRGP04196 525 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 ISG15P05161 165 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 HCKP08631 526 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 DNASE1P24855 282 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 MMP16P51512 607 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 CLDN17P56750 224 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 DEFA5Q01523 94 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 ZFP36L1Q07352 338 aaKnown RBP10.69□□□□□ -0.7
COL27A1-202ENST00000451716 CSRP2Q16527 193 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 TMEM95Q3KNT9 176 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 TMEM244Q5VVB8 128 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 RAET1LQ5VY80 246 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 C1orf210Q8IVY1 113 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 OR52N4Q8NGI2 321 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 CMBLQ96DG6 245 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 CNTD2Q9H8S5 307 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 PCDHB10Q9UN67 800 aa10.69□□□□□ -0.7
COL27A1-202ENST00000451716 A0A1B0GUH1 482 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 MPTX1A8MV57 137 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 C9J4A7 227 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 SIGLEC5O15389 551 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 VSIG10L2P0DP72 767 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 FSTP19883 344 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 SCAND1P57086 179 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 SNRPEP62304 92 aaKnown RBP10.68□□□□□ -0.7
COL27A1-202ENST00000451716 OC90Q02509 493 aaPredicted RBP10.68□□□□□ -0.7
COL27A1-202ENST00000451716 SIGLEC14Q08ET2 396 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 FAM74A1Q5RGS3 127 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 GLDNQ6ZMI3 551 aaPredicted RBP10.68□□□□□ -0.7
COL27A1-202ENST00000451716 TMEM156Q8N614 296 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 OR13C9Q8NGT0 318 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 TMEM41AQ96HV5 264 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 UCN2Q96RP3 112 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 PROK2Q9HC23 129 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 MGAT4CQ9UBM8 478 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 A8MXK9 166 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 G3V3Q6 166 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 M0QYG6 137 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 SULT1C2O00338 296 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 MPC2O95563 127 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 UBCP0CG48 685 aaKnown RBP10.68□□□□□ -0.7
COL27A1-202ENST00000451716 TAF13Q15543 124 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 RTN4RL2Q86UN3 420 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 MEIOBQ8N635 442 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 OR1J2Q8NGS2 313 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 C15orf40Q8WUR7 153 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 SEH1LQ96EE3 360 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF319Q9P2F9 582 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 NXT1Q9UKK6 140 aaKnown RBP10.68□□□□□ -0.7
COL27A1-202ENST00000451716 GAB2Q9UQC2 676 aa10.68□□□□□ -0.7
COL27A1-202ENST00000451716 TMEM235A6NFC5 223 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF726A6NNF4 738 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 TEX46H3BTG2 121 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 TXNL1O43396 289 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 ABOP16442 354 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 CFPP27918 469 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 HSD11B1P28845 292 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 RSPO4Q2I0M5 234 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 LGALSLQ3ZCW2 172 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 B3GNTL1Q67FW5 361 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 DEGS2Q6QHC5 323 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 OR2AJ1Q8NGZ0 328 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 LRRC46Q96FV0 321 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 OXGR1Q96P68 337 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 NECAB3Q96P71 396 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 CHST6Q9GZX3 395 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 TREM2Q9NZC2 230 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 MAB21L2Q9Y586 359 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 LOC400499M0QZD8 3231 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 NSG1A0A0A6YYJ2 146 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 C5orf63A6NC05 138 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 SIX6O95475 246 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 CER1O95813 267 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 F10P00742 488 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 CSN2P05814 226 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF81P51508 661 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 ZXDAP98168 799 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 TMPPEQ6ZT21 453 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 ADGRE4PQ86SQ3 457 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 NKAIN3Q8N8D7 197 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 OR2Y1Q8NGV0 311 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 CYYR1Q96J86 154 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 ZNF700Q9H0M5 742 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 NPDC1Q9NQX5 325 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 PRRC2CQ9Y520 2896 aaKnown RBP10.67□□□□□ -0.7
COL27A1-202ENST00000451716 AQP7P3A6NL99 342 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 PRAF2O60831 178 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 CSF1P09603 554 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 RFC3P40938 356 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 PTGFRP43088 359 aa10.67□□□□□ -0.7
COL27A1-202ENST00000451716 MC2RQ01718 297 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms