RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TBC1D28Q2M2D7 210 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 CDONQ4KMG0 1287 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 RGS7BPQ6MZT1 257 aaPredicted RBP14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 SPATC1Q76KD6 591 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 SYS1Q8N2H4 156 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 YIPF7Q8N8F6 280 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 CPEB3Q8NE35 698 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 OR52N1Q8NH53 320 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 TBC1D15Q8TC07 691 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 S100ZQ8WXG8 99 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 DCLRE1CQ96SD1 692 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 KCNJ15Q99712 375 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 MND1Q9BWT6 205 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 TTTY10Q9BZA0 68 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 SP140LQ9H930 580 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 ELOVL3Q9HB03 270 aa14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 DDX28Q9NUL7 540 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-204ENST00000450303 J3QLW9 94 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 HPXP02790 462 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 MT-ND5P03915 603 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 LIMS3P0CW19 117 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 LIMS4P0CW20 117 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 NAT2P11245 290 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 ZNF19P17023 458 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 STOMP27105 288 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 DCTDP32321 178 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 GZMKP49863 264 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 TPTEP56180 551 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 SPCS2Q15005 226 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 ZNF829Q3KNS6 432 aaPredicted RBP14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 CHRFAM7AQ494W8 412 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 ARMCX4Q5H9R4 360 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 ARL9Q6T311 187 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 LRRN1Q6UXK5 716 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 USP43Q70EL4 1123 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 SSX6Q7RTT6 188 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 NANOGP1Q8N7R0 232 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 MSI2Q96DH6 328 aaKnown RBP14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 C4orf36Q96KX1 117 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 AMELYQ99218 206 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 SOX7Q9BT81 388 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 MS4A5Q9H3V2 200 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 PALMDQ9NP74 551 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 PNRC2Q9NPJ4 139 aaKnown RBP14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 SLCO1C1Q9NYB5 712 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 GNG8Q9UK08 70 aa14.56□□□□□ -0.08
PRPF40A-204ENST00000450303 LOC100289279A0A1B0GTE1 492 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 PSMD9O00233 223 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 COL8A2P25067 703 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 OPRL1P41146 370 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 GBX2P52951 348 aaPredicted RBP14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 UCP2P55851 309 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 WNT4P56705 351 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 ZNF846Q147U1 533 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 TP53I3Q53FA7 332 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 UNQ6126/PRO20091Q6UXV3 157 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 RFLNBQ8N5W9 214 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 ZNF283Q8N7M2 679 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 OR10S1Q8NGN2 331 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 SYNPRQ8TBG9 265 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 WDR12Q9GZL7 423 aaKnown RBP14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 CHODLQ9H9P2 273 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 HMG20AQ9NP66 347 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 TAAR3PQ9P1P4 343 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 EIF3KQ9UBQ5 218 aaKnown RBP14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 CLEC2DQ9UHP7 191 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 LRP12Q9Y561 859 aa14.55□□□□□ -0.08
PRPF40A-204ENST00000450303 F5H5K5 113 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 LMX1BO60663 402 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 HSMCR30P0CW71 290 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 GIFP27352 417 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 IL2RGP31785 369 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 TGFBR2P37173 567 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 OR12D2P58182 307 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 MED22Q15528 200 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 NKPD1Q17RQ9 610 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 ZNF684Q5T5D7 378 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 DRAM2Q6UX65 266 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 IL17RELQ6ZVW7 336 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 OR1J1Q8NGS3 322 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 SPRYD4Q8WW59 207 aaPredicted RBP14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 ZNF649Q9BS31 505 aa14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 MRM2Q9UI43 246 aaKnown RBP14.54□□□□□ -0.08
PRPF40A-204ENST00000450303 LOC100509620A0A075B734 347 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 C5orf49A4QMS7 147 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 M0R135 149 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 CCRL2O00421 344 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 LILRA1O75019 489 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 TGFAP01135 160 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 RAD52P43351 418 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 MAGEB1P43366 347 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 SLC6A9P48067 706 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 RGS6P49758 472 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 PRKXP51817 358 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 TAS2R43P59537 309 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 VBP1P61758 197 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 RIN1Q13671 783 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 OR2G6Q5TZ20 316 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 LIPNQ5VXI9 398 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 C16orf87Q6PH81 154 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms