RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 HSD17B12Q53GQ0 312 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 RGS7BPQ6MZT1 257 aaPredicted RBP12.58□□□□□ -0.4
TNF-208ENST00000449264 GDPGP1Q6ZNW5 385 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 PLPP7Q8NBV4 271 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 BHLHE23Q8NDY6 225 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 SEMA6DQ8NFY4 1073 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 KBTBD8Q8NFY9 601 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 OR56B2PQ8NGI1 322 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 C12orf43Q96C57 262 aaKnown RBP12.58□□□□□ -0.4
TNF-208ENST00000449264 ADAT3Q96EY9 351 aaPredicted RBP12.58□□□□□ -0.4
TNF-208ENST00000449264 PIK3IP1Q96FE7 263 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 KCTD7Q96MP8 289 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 REPIN1Q9BWE0 567 aaKnown RBP12.58□□□□□ -0.4
TNF-208ENST00000449264 OPA3Q9H6K4 179 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 ZNF275Q9NSD4 429 aaPredicted RBP12.58□□□□□ -0.4
TNF-208ENST00000449264 ATP23Q9Y6H3 246 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 V9GYS6 101 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 PKDREJQ9NTG1 2253 aa12.58□□□□□ -0.4
TNF-208ENST00000449264 PIN1P1O15428 100 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 ARL6IP5O75915 188 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 FGF9P31371 208 aaPredicted RBP12.57□□□□□ -0.4
TNF-208ENST00000449264 MPV17P39210 176 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 MAP2K3P46734 347 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 NKX6-1P78426 367 aaPredicted RBP12.57□□□□□ -0.4
TNF-208ENST00000449264 OR8B8Q15620 311 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 OR2T2Q6IF00 324 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 PAMR1Q6UXH9 720 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 MEX3BQ6ZN04 569 aaKnown RBP12.57□□□□□ -0.4
TNF-208ENST00000449264 DMRTC2Q8IXT2 367 aaPredicted RBP12.57□□□□□ -0.4
TNF-208ENST00000449264 NDNFQ8TB73 568 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 KLF14Q8TD94 323 aaPredicted RBP12.57□□□□□ -0.4
TNF-208ENST00000449264 THRSPQ92748 146 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 CMBLQ96DG6 245 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 MARS2Q96GW9 593 aaKnown RBP12.57□□□□□ -0.4
TNF-208ENST00000449264 FAM192AQ9GZU8 254 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 TRBV5-7A0A0A0MS05 114 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 LOC390937A0A1W2PQ73 354 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 A1L4Q6 167 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 DEFB108AA8MXU0 73 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 UCHL1P09936 223 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 IGFBP2P18065 325 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 MYL9P24844 172 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 GCH1P30793 250 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 SERPINB10P48595 397 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 FABP6P51161 128 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 RPS23P62266 143 aaKnown RBP12.57□□□□□ -0.4
TNF-208ENST00000449264 MXD1Q05195 221 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 RIPPLY1Q0D2K3 151 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 TNK1Q13470 666 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 UNQ9370/PRO34162Q6UXP9 181 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 FBXW12Q6X9E4 464 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 OR5AS1Q8N127 324 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 TAS2R4Q9NYW5 299 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 RNF115Q9Y4L5 304 aa12.57□□□□□ -0.4
TNF-208ENST00000449264 KLF2Q9Y5W3 355 aaPredicted RBP12.57□□□□□ -0.4
TNF-208ENST00000449264 TRAV8-7A0A075B6U6 113 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 SMIM30A4D0T7 59 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 CD300LBA8K4G0 201 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 THBS4P35443 961 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 GLRXP35754 106 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 SPCS2Q15005 226 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 ZNF718Q3SXZ3 478 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 CCDC54Q8NEL0 328 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 NUP37Q8NFH4 326 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 OR13C9Q8NGT0 318 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 FAM222BQ8WU58 562 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 DGCR14Q96DF8 476 aaKnown RBP12.56□□□□□ -0.4
TNF-208ENST00000449264 BCL7BQ9BQE9 202 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 TCF7L1Q9HCS4 588 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 CA10Q9NS85 328 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 CKLFQ9UBR5 152 aa12.56□□□□□ -0.4
TNF-208ENST00000449264 HRNRQ86YZ3 2850 aaPredicted RBP12.56□□□□□ -0.4
TNF-208ENST00000449264 SHISA3A0PJX4 238 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 DHRS7CA6NNS2 312 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 SHISA9B4DS77 424 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 SLC22A1O15245 554 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 CDRT1O95170 752 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 PLAUP00749 431 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 RAF1P04049 648 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 RAC2P15153 192 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 SDC2P34741 201 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 PSG7Q13046 419 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 MSMPQ1L6U9 139 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 DMRTC1Q5HYR2 192 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 ASPHD2Q6ICH7 369 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 SERPINA12Q8IW75 414 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 C1orf174Q8IYL3 243 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 TMEM171Q8WVE6 324 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 PHYHIPQ92561 330 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 NEUROG1Q92886 237 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 PAPOLGQ9BWT3 736 aaKnown RBP12.55□□□□□ -0.4
TNF-208ENST00000449264 DCSTAMPQ9H295 470 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 DUSP13Q9UII6 198 aa12.55□□□□□ -0.4
TNF-208ENST00000449264 ZNF816-ZNF321PA0A0X1KG74 233 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 ZNF701M0R085 212 aaPredicted RBP12.54□□□□□ -0.4
TNF-208ENST00000449264 TIMM8AO60220 97 aaPredicted RBP12.54□□□□□ -0.4
TNF-208ENST00000449264 LILRA1O75019 489 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 MAS1P04201 325 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 SRMP19623 302 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms