RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 OR4M2Q8NGB6 313 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 OR11L1Q8NGX0 322 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 RBM4BQ9BQ04 359 aaKnown RBP10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 TMEM246Q9BRR3 403 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 GABARAPL3Q9BY60 117 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 TMPRSS13Q9BYE2 586 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 RIBC2Q9H4K1 309 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 RGCCQ9H4X1 137 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 NIPAL2Q9H841 368 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 FN3KRPQ9HA64 309 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 MMP26Q9NRE1 261 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 COPS3Q9UNS2 423 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 RHBDD3Q9Y3P4 386 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 PPIAL4AQ9Y536 164 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 CUBNO60494 3623 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 SLC22A31A6NKX4 558 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 ANKRD30BLA7E2S9 258 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 TRAPPC2LH3BP13 241 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 J3QLI3 93 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 PSMA6P60900 246 aaKnown RBP10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 HOXA4Q00056 320 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 ROM1Q03395 351 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 ZNF404Q494X3 552 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 DCAF12L2Q5VW00 463 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 DEGS2Q6QHC5 323 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 ZNF826PQ6ZT77 177 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 RFLNBQ8N5W9 214 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 C19orf18Q8NEA5 215 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 DEFB108BQ8NET1 73 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 OR8B12Q8NGG6 310 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 ASB17Q8WXJ9 295 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 LYZL4Q96KX0 146 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 CNN2Q99439 309 aaKnown RBP10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 MROQ9BYG7 248 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 TTTY10Q9BZA0 68 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 METTL17Q9H7H0 456 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 ADGRL4Q9HBW9 690 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 C14orf119Q9NWQ9 140 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 HAO2Q9NYQ3 351 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 RNF7Q9UBF6 113 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 METRNQ9UJH8 293 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 POLR3KQ9Y2Y1 108 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 TMEM14AQ9Y6G1 99 aa10.67□□□□□ -0.7
PRPF40A-203ENST00000448428 LOC105371242A0A075B767 164 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 PPIAL4CA0A0B4J2A2 164 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 TMEM269A0A1B0GVZ9 245 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 ACOD1A6NK06 481 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 MAGEB4O15481 346 aaPredicted RBP10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 ZNF254O75437 659 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 ALPLP05186 524 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 GATA3P23771 443 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 ACKR3P25106 362 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 DCTDP32321 178 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 SRSF2Q01130 221 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 MZT1Q08AG7 82 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 OR8B8Q15620 311 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 ESCO2Q56NI9 601 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 LYPD2Q6UXB3 125 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 WDR86Q86TI4 376 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 GID4Q8IVV7 300 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 C11orf53Q8IXP5 236 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 SLC35F2Q8IXU6 374 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 ZNF679Q8IYX0 411 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 BOLLQ8N9W6 283 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 CSNK2A3Q8NEV1 391 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 OR8S1Q8NH09 359 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 UBE2FQ969M7 185 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 PPP1R14AQ96A00 147 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 OR8B4Q96RC9 309 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 APOL4Q9BPW4 351 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 C7orf69Q9H7B7 122 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 C1orf123Q9NWV4 160 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 FAM206AQ9NX38 181 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 MIOXQ9UGB7 285 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 OPN4Q9UHM6 478 aa10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 FBN1P35555 2871 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-203ENST00000448428 RNF212BA8MTL3 300 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 A8MXK9 166 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 EI24O14681 340 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 LHBP01229 141 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 RPS2P15880 293 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 ADRA2CP18825 462 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 CPT2P23786 658 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 RIDAP52758 137 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 CXCR4P61073 352 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 SFRP4Q6FHJ7 346 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 ZNF322Q6U7Q0 402 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 C10orf67Q8IYJ2 551 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 OR51G2Q8NGK0 314 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 OR8J1Q8NGP2 316 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 TMEM158Q8WZ71 300 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 NEIL1Q96FI4 390 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 MNTQ99583 582 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 PAPOLGQ9BWT3 736 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 PBOV1Q9GZY1 135 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 CLN6Q9NWW5 311 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 USE1Q9NZ43 259 aa10.65□□□□□ -0.7
PRPF40A-203ENST00000448428 WARS2Q9UGM6 360 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms