RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 B4DSR2 109 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
HDAC4-204ENST00000446876 MSMBP08118 114 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 GATA4P43694 442 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 OR8B8Q15620 311 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 LRRC36Q1X8D7 754 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 CR1LQ2VPA4 569 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 CHRFAM7AQ494W8 412 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 FAM120AOSQ5T036 256 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 DEGS2Q6QHC5 323 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 WDR86Q86TI4 376 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 C19orf18Q8NEA5 215 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 OR10H4Q8NGA5 316 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 RAB39BQ96DA2 213 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 PAPOLGQ9BWT3 736 aaKnown RBP12.47□□□□□ -0.41
HDAC4-204ENST00000446876 PBOV1Q9GZY1 135 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 SLC22A4Q9H015 551 aa12.47□□□□□ -0.41
HDAC4-204ENST00000446876 A0A1W2PQL4 384 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-204ENST00000446876 PHYHO14832 338 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 GMDSO60547 372 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 ZNF254O75437 659 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 RPP14O95059 124 aaKnown RBP12.46□□□□□ -0.41
HDAC4-204ENST00000446876 GRPP07492 148 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 ANPEPP15144 967 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 CFL1P23528 166 aaKnown RBP12.46□□□□□ -0.41
HDAC4-204ENST00000446876 DDOSTP39656 456 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 DVL1P1P54792 670 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-204ENST00000446876 SEC61A1P61619 476 aaKnown RBP12.46□□□□□ -0.41
HDAC4-204ENST00000446876 SNRPGP62308 76 aaKnown RBP12.46□□□□□ -0.41
HDAC4-204ENST00000446876 POU4F2Q12837 409 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 ZNF829Q3KNS6 432 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-204ENST00000446876 LPCAT4Q643R3 524 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 ZNF826PQ6ZT77 177 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 GLCCI1Q86VQ1 547 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 ENTHD1Q8IYW4 607 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 GALNT4Q8N4A0 578 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 CELF2-AS1Q8N7Q2 184 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 OR51F2Q8NH61 342 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 TMEM186Q96B77 213 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 MNTQ99583 582 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 SHARPINQ9H0F6 387 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 RGCCQ9H4X1 137 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 HIF1ANQ9NWT6 349 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 TMEM160Q9NX00 188 aa12.46□□□□□ -0.41
HDAC4-204ENST00000446876 NOP16Q9Y3C1 178 aaKnown RBP12.46□□□□□ -0.41
HDAC4-204ENST00000446876 SVEP1Q4LDE5 3571 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 A6NLC8 198 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 LOC110117498-PIK3R3F6TDL0 507 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 DLGAP1O14490 977 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 PLPP2O43688 288 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 OR2T7P0C7T2 308 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 GABRB1P18505 474 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 PEX2P28328 305 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 DCTDP32321 178 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 ATP6V1E1P36543 226 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 MDH2P40926 338 aaKnown RBP12.45□□□□□ -0.42
HDAC4-204ENST00000446876 EGR3Q06889 387 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 LRRC28Q86X40 367 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-204ENST00000446876 YIPF7Q8N8F6 280 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 BOLLQ8N9W6 283 aaKnown RBP12.45□□□□□ -0.42
HDAC4-204ENST00000446876 CSNK2A3Q8NEV1 391 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 OR11L1Q8NGX0 322 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 OR2T27Q8NH04 317 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 OR8S1Q8NH09 359 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 OR51E1Q8TCB6 317 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 Q8TCH9 128 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 TRUB1Q8WWH5 349 aaKnown RBP12.45□□□□□ -0.42
HDAC4-204ENST00000446876 RFKQ969G6 155 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 RNFT2Q96EX2 444 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 FAM71F1Q96KD3 344 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-204ENST00000446876 BEX2Q9BXY8 128 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 FGF23Q9GZV9 251 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-204ENST00000446876 G6PC2Q9NQR9 355 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 GPR84Q9NQS5 396 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 FAM118AQ9NWS6 357 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 C1orf123Q9NWV4 160 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 NUFIP1Q9UHK0 495 aaKnown RBP12.45□□□□□ -0.42
HDAC4-204ENST00000446876 CDC42EP3Q9UKI2 254 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 PCDHB10Q9UN67 800 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 R4GMQ9 66 aa12.45□□□□□ -0.42
HDAC4-204ENST00000446876 JMJD1CQ15652 2540 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-204ENST00000446876 LOC100130705A0A1B0GUX0 176 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 ERICH4A6NGS2 130 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 LRRC30A6NM36 301 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 ZNF850A8MQ14 1090 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 CEACAM18A8MTB9 384 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 IFNL4K9M1U5 179 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 PTBP3O95758 552 aaKnown RBP12.44□□□□□ -0.42
HDAC4-204ENST00000446876 TTRP02766 147 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 KRT8P05787 483 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 IRF2P14316 349 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 CD80P33681 288 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 GNALP38405 381 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 MTNR1AP48039 350 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 CSNK2BP67870 215 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 LCN2P80188 198 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 ZNF85Q03923 595 aa12.44□□□□□ -0.42
HDAC4-204ENST00000446876 GABPB1Q06547 395 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms