RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 GAMTQ14353 236 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 HSPB2Q16082 182 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 ZNF674Q2M3X9 581 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 PLAC9Q5JTB6 97 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 ZNF574Q6ZN55 896 aaPredicted RBP12.4□□□□□ -0.42
VPS52-212ENST00000445902 MR1Q95460 341 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 OR2M4Q96R27 311 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 MESP1Q9BRJ9 268 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 RTN4RQ9BZR6 473 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 DNAJB11Q9UBS4 358 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 R4GMQ9 66 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 ZNF264O43296 627 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 RAMP1O60894 148 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 RAD51DO75771 328 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 CDX1P47902 265 aaPredicted RBP12.4□□□□□ -0.42
VPS52-212ENST00000445902 ROM1Q03395 351 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 C14orf28Q4W4Y0 310 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 HIST2H3AQ71DI3 136 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 OR13G1Q8NGZ3 307 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 OR1E3Q8WZA6 343 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 ZDHHC12Q96GR4 267 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 SCRT1Q9BWW7 348 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 SH3BGRL3Q9H299 93 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 GFOD1Q9NXC2 390 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 RCL1Q9Y2P8 373 aaKnown RBP12.4□□□□□ -0.42
VPS52-212ENST00000445902 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 IGLV1-36A0A0B4J1U3 117 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 LOC390937A0A1W2PQ73 354 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 TAAR5O14804 337 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 PPM1AP35813 382 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 ZNF84P51523 738 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 RAP1AP62834 184 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 SP3Q02447 781 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 SURF2Q15527 256 aaPredicted RBP12.39□□□□□ -0.43
VPS52-212ENST00000445902 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 LYPD6Q86Y78 171 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 OR5H2Q8NGV7 314 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 ASB16Q96NS5 453 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 GNRHR2Q96P88 292 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 RARRES2Q99969 163 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 OR10A5Q9H207 317 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 OPA3Q9H6K4 179 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 SPAG17Q6Q759 2223 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 CD37P11049 281 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 AMY2BP19961 511 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 BCKDHBP21953 392 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 RAB38P57729 211 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 QRFPP83859 136 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 ARFRP1Q13795 201 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 KIR2DS3Q14952 304 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 CDCP2Q5VXM1 449 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 HEPN1Q6WQI6 88 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 NKAIN3Q8N8D7 197 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 DTWD2Q8NBA8 298 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 GPR61Q9BZJ8 451 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 ZDHHC8Q9ULC8 765 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 JTBO76095 146 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 ACRP10323 421 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 SERPINA2P20848 420 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 THBS4P35443 961 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 PPP1CCP36873 323 aaKnown RBP12.39□□□□□ -0.43
VPS52-212ENST00000445902 RSU1Q15404 277 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 RPUSD3Q6P087 351 aaKnown RBP12.39□□□□□ -0.43
VPS52-212ENST00000445902 UBAC2Q8NBM4 344 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 HSD17B11Q8NBQ5 300 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 LIPHQ8WWY8 451 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 PTX4Q96A99 478 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 SUCNR1Q9BXA5 334 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 CNTNAP3Q9BZ76 1288 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 HDGFL3Q9Y3E1 203 aa12.39□□□□□ -0.43
VPS52-212ENST00000445902 CXCR1P25024 350 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 OR3A2P47893 321 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 ASCL1P50553 236 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 ZNF321PQ8N8H1 164 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 APCDD1LQ8NCL9 501 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 MALSU1Q96EH3 234 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 DGAT2Q96PD7 388 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 SMOC1Q9H4F8 434 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 LMAN1LQ9HAT1 526 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 FAM212BQ9NTI7 297 aaPredicted RBP12.38□□□□□ -0.43
VPS52-212ENST00000445902 RFNGQ9Y644 331 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 CDC14CA4D256 554 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 SCDO00767 359 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
VPS52-212ENST00000445902 XRCC2O43543 280 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 HCRTR2O43614 444 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 HLA-DOBP13765 273 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 RPL27P61353 136 aaKnown RBP12.38□□□□□ -0.43
VPS52-212ENST00000445902 IL15RAQ13261 267 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 RHEBQ15382 184 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 C2orf27AQ580R0 203 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 GLIPR1L1Q6UWM5 242 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.38□□□□□ -0.43
VPS52-212ENST00000445902 ARHGAP5-AS1Q96IT6 56 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 FAM60AQ9NP50 221 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 EHFQ9NZC4 300 aa12.38□□□□□ -0.43
VPS52-212ENST00000445902 REV3LO60673 3130 aa12.37□□□□□ -0.43
VPS52-212ENST00000445902 TNFSF14O43557 240 aa12.37□□□□□ -0.43
VPS52-212ENST00000445902 SRSF10O75494 262 aaKnown RBP12.37□□□□□ -0.43
VPS52-212ENST00000445902 RBP2P50120 134 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms