RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 THADAQ6YHU6 1953 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 A0A1B0GV50 99 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 A0A1W2PNR3 127 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 FTCDNL1E5RQL4 147 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 FOLR1P15328 257 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 CD80P33681 288 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 SUPT4H1P63272 117 aaKnown RBP12.6□□□□□ -0.39
ERCC3-203ENST00000445889 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 FAM69BQ5VUD6 431 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 KIAA0895LQ68EN5 471 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 NKAIN3Q8N8D7 197 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 NAXEQ8NCW5 288 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 OR1L3Q8NH93 324 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 SFT2D1Q8WV19 159 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 LIN37Q96GY3 246 aaPredicted RBP12.6□□□□□ -0.39
ERCC3-203ENST00000445889 VN1R1Q9GZP7 353 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 MMP26Q9NRE1 261 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 TMEM100Q9NV29 134 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 CLEC1BQ9P126 229 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 COPS7AQ9UBW8 275 aa12.6□□□□□ -0.39
ERCC3-203ENST00000445889 MRPS28Q9Y2Q9 187 aaKnown RBP12.6□□□□□ -0.39
ERCC3-203ENST00000445889 DBX1A6NMT0 343 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 E9PLN8 166 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 MED6O75586 246 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 ISG15P05161 165 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 ZNF20P17024 532 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 GPR85P60893 370 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 DCDP81605 110 aaKnown RBP12.59□□□□□ -0.39
ERCC3-203ENST00000445889 TDGQ13569 410 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 TMEM128Q5BJH2 165 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 PHF19Q5T6S3 580 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 NUP54Q7Z3B4 507 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 HOGA1Q86XE5 327 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 NANPQ8TBE9 248 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 NRIP2Q9BQI9 281 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 ELL3Q9HB65 397 aaPredicted RBP12.59□□□□□ -0.39
ERCC3-203ENST00000445889 ZNF304Q9HCX3 659 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 ASH2LQ9UBL3 628 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 EDARQ9UNE0 448 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 CARHSP1Q9Y2V2 147 aaKnown RBP12.59□□□□□ -0.39
ERCC3-203ENST00000445889 EIF3GO75821 320 aaKnown RBP eCLIP12.59□□□□□ -0.39
ERCC3-203ENST00000445889 SFTA3P0C7M3 94 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 RAB6AP20340 208 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 LPAR6P43657 344 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 SLC16A13Q7RTY0 426 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 RNF133Q8WVZ7 376 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 GPR84Q9NQS5 396 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 DZANK1Q9NVP4 752 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 LPAR3Q9UBY5 353 aa12.59□□□□□ -0.39
ERCC3-203ENST00000445889 ZNF107Q9UII5 783 aaPredicted RBP12.59□□□□□ -0.39
ERCC3-203ENST00000445889 IGKV3D-11A0A0A0MRZ8 115 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 DAOP14920 347 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 HSD11B1P28845 292 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 PTGFRP43088 359 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 FOXF1Q12946 379 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 PEA15Q15121 130 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 RBMS3Q6XE24 437 aaKnown RBP12.58□□□□□ -0.39
ERCC3-203ENST00000445889 H1FNTQ75WM6 255 aaPredicted RBP12.58□□□□□ -0.39
ERCC3-203ENST00000445889 C20orf24Q9BUV8 137 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 SEC11CQ9BY50 192 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 FBRSQ9HAH7 460 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 FANCFQ9NPI8 374 aa12.58□□□□□ -0.39
ERCC3-203ENST00000445889 MYO7BQ6PIF6 2116 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 MBTPS2O43462 519 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 EFNA2O43921 213 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 RAMP1O60894 148 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 AMY2BP19961 511 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 MMP16P51512 607 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.58□□□□□ -0.4
ERCC3-203ENST00000445889 RTBDNQ9BSG5 229 aaPredicted RBP12.58□□□□□ -0.4
ERCC3-203ENST00000445889 NMES1Q9C002 83 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 PLA2G2EQ9NZK7 142 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 RCC2Q9P258 522 aaKnown RBP12.58□□□□□ -0.4
ERCC3-203ENST00000445889 WDFY4Q6ZS81 3184 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 GIMD1P0DJR0 217 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 FAM57BQ71RH2 274 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 OR1N1Q8NGS0 311 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 DAZLQ92904 295 aaKnown RBP12.58□□□□□ -0.4
ERCC3-203ENST00000445889 PTX4Q96A99 478 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 SLC2A4RGQ9NR83 387 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 GPR132Q9UNW8 380 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 PCDHGA1Q9Y5H4 931 aa12.58□□□□□ -0.4
ERCC3-203ENST00000445889 ZNF814B7Z6K7 855 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 PRSS44E7EML9 344 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 RNASEK-C17orf49H0YIS7 233 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 SCGB1D2O95969 90 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 CD37P11049 281 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 OR3A2P47893 321 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 CX3CR1P49238 355 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 BLKP51451 505 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 ZNF121P58317 390 aaPredicted RBP12.57□□□□□ -0.4
ERCC3-203ENST00000445889 C10orf91Q5T1B1 145 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 FAHD2BQ6P2I3 314 aaPredicted RBP12.57□□□□□ -0.4
ERCC3-203ENST00000445889 DTX1Q86Y01 620 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 OR13G1Q8NGZ3 307 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 C14orf79Q96F83 325 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 FAHD2AQ96GK7 314 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 AKR1E2Q96JD6 320 aa12.57□□□□□ -0.4
ERCC3-203ENST00000445889 HDHD3Q9BSH5 251 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms