RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ADAT1Q9BUB4 502 aaKnown RBP12.01□□□□□ -0.49
SSBP3-208ENST00000444533 PAPOLGQ9BWT3 736 aaKnown RBP12.01□□□□□ -0.49
SSBP3-208ENST00000444533 CHODLQ9H9P2 273 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 PLEKHA1Q9HB21 404 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 PLCXD1Q9NUJ7 323 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 ACOXLQ9NUZ1 547 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 C14orf119Q9NWQ9 140 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 BLOC1S6Q9UL45 172 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 DIMT1Q9UNQ2 313 aaKnown RBP12.01□□□□□ -0.49
SSBP3-208ENST00000444533 MYRFQ9Y2G1 1151 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 CSMD2Q7Z408 3487 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 PDZD2O15018 2839 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 hCG_38984A0A1B0GV85 526 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 PRR32B1ATL7 298 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 IFNL4K9M1U5 179 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 LY6HO94772 140 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 UBCP0CG48 685 aaKnown RBP12□□□□□ -0.49
SSBP3-208ENST00000444533 ACHEP22303 614 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 CA6P23280 308 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 OR12D2P58182 307 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 MFGE8Q08431 387 aaPredicted RBP12□□□□□ -0.49
SSBP3-208ENST00000444533 RIPPLY1Q0D2K3 151 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 ST3GAL4Q11206 333 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 C6orf141Q5SZD1 244 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 AHSA2Q719I0 299 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 DOK3Q7L591 496 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 ELMOD2Q8IZ81 293 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 WFDC11Q8NEX6 87 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 OR10AD1Q8NGE0 317 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 TIMD4Q96H15 378 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 FAM71F1Q96KD3 344 aaPredicted RBP12□□□□□ -0.49
SSBP3-208ENST00000444533 JAM3Q9BX67 310 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 COMMD4Q9H0A8 199 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 GPR84Q9NQS5 396 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 ERGIC3Q9Y282 383 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 CAB39Q9Y376 341 aaPredicted RBP12□□□□□ -0.49
SSBP3-208ENST00000444533 ARFGEF3Q5TH69 2177 aa12□□□□□ -0.49
SSBP3-208ENST00000444533 LRRC30A6NM36 301 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 CLDN25C9JDP6 229 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 MYL12BO14950 172 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 SYT7O43581 403 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 XPNPEP2O43895 674 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 CDC14BO60729 498 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 HPXP02790 462 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 HEXAP06865 529 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 CCDC159P0C7I6 412 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 IRF2P14316 349 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 PRSS12P56730 875 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 TMEM33P57088 247 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 OR8B8Q15620 311 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF684Q5T5D7 378 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 TMEM244Q5VVB8 128 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 CATSPERDQ86XM0 798 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 CELF2-AS1Q8N7Q2 184 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 FBLIM1Q8WUP2 373 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 CCL17Q92583 94 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 GTF3AQ92664 365 aaKnown RBP11.99□□□□□ -0.49
SSBP3-208ENST00000444533 RORBQ92753 470 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 GGHQ92820 318 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 OR2V2Q96R30 315 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 MICU1Q9BPX6 476 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 PSORS1C1Q9UIG5 152 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 ENPP5Q9UJA9 477 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 PPP1R3CQ9UQK1 317 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 MPC1Q9Y5U8 109 aa11.99□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF816-ZNF321PA0A0X1KG74 233 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 PTGES3LE9PB15 166 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 SLC1A7O00341 560 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 PPIHO43447 177 aaKnown RBP11.98□□□□□ -0.49
SSBP3-208ENST00000444533 DHRS3O75911 302 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 PNPP00491 289 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 TTRP02766 147 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 CD99P14209 185 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 PSMB10P40306 273 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 CRYBB2P43320 205 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 GPR6P46095 362 aaPredicted RBP11.98□□□□□ -0.49
SSBP3-208ENST00000444533 CDH15P55291 814 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 TNK1Q13470 666 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 ODF4Q2M2E3 257 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 ZBTB37Q5TC79 503 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 Q6ZR03 302 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 C1orf87Q8N0U7 546 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF676Q8N7Q3 588 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 OR11L1Q8NGX0 322 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 OR2G2Q8NGZ5 317 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 C10orf105Q8TEF2 133 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 PIGCQ92535 297 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 HPS1Q92902 700 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 RAB1CQ92928 201 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 ERGIC1Q969X5 290 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 TRIM36Q9NQ86 728 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 G6PC2Q9NQR9 355 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF319Q9P2F9 582 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 SLC22A13Q9Y226 551 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 PIGLQ9Y2B2 252 aa11.98□□□□□ -0.49
SSBP3-208ENST00000444533 TEX15Q9BXT5 2789 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 C5orf63A6NC05 138 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 TMEM212A6NML5 194 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 DHRS7CA6NNS2 312 aa11.97□□□□□ -0.49
SSBP3-208ENST00000444533 F5H5P2 479 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms