RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ARR3P36575 388 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 SNTB1Q13884 538 aaKnown RBP20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 ARHGEF39Q8N4T4 335 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 CMBLQ96DG6 245 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 ZPBPQ9BS86 351 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 SDHAF2Q9NX18 166 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 LTBP1Q14766 1721 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 SPRY1O43609 319 aaPredicted RBP20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 SLC25A30Q5SVS4 291 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 PPP1R1CQ8WVI7 109 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 ST8SIA4Q92187 359 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 C10orf90Q96M02 699 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 CMTM3Q96MX0 182 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 TAAR9Q96RI9 348 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 PFDN5Q99471 154 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 NGBQ9NPG2 151 aa20.07■□□□□ 0.8
CTDSPL-206ENST00000443503 IFNA10P01566 189 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 F2RL1P55085 397 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 NLRC3Q7RTR2 1065 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 KCNRGQ8N5I3 272 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 FRZBQ92765 325 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 RAB39BQ96DA2 213 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 GHRLQ9UBU3 117 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 MTFP1Q9UDX5 166 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 SERPINA7P05543 415 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 SOHLH1Q5JUK2 328 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 PTPMT1Q8WUK0 201 aaPredicted RBP20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 TAF9BQ9HBM6 251 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 GFOD1Q9NXC2 390 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 WNT11O96014 354 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 MESTQ5EB52 335 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 ACER2Q5QJU3 275 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 OR13C8Q8NGS7 320 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 TERB2Q8NHR7 220 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 TRIB1Q96RU8 372 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 POLDIP2Q9Y2S7 368 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 CCDC187A0A096LP49 1063 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 SPINT2O43291 252 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 SSBP1Q04837 148 aaKnown RBP20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 LYG2Q86SG7 212 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 D2HGDHQ8N465 521 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 MCHR2Q969V1 340 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 FBXO4Q9UKT5 387 aa20.06■□□□□ 0.8
CTDSPL-206ENST00000443503 ICMTO60725 284 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 SARAFQ96BY9 339 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 NDUFB6O95139 128 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 AVPR2P30518 371 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 TAS2R30P59541 319 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 OR1F12Q8NHA8 337 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 MIXL1Q9H2W2 232 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 SDK2Q58EX2 2172 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 ZNF732B4DXR9 585 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 CTXN2P0C2S0 81 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 ZC3HAV1LQ96H79 300 aaKnown RBP20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 WFDC6Q9BQY6 131 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 ICAM5Q9UMF0 924 aa20.05■□□□□ 0.8
CTDSPL-206ENST00000443503 SIRPB1O00241 398 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 FCARP24071 287 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 OR8B8Q15620 311 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 FBXL14Q8N1E6 418 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 TMEM229BQ8NBD8 167 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 NUBPLQ8TB37 319 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 SSX3Q99909 188 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 CLEC1BQ9P126 229 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 THBS4P35443 961 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 GLDNQ6ZMI3 551 aaPredicted RBP20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 ZNF573Q86YE8 665 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 RASL10BQ96S79 203 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 MARVELD1Q9BSK0 173 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 RPS10-NUDT3A0A1W2PQS6 291 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 RPS10P46783 165 aaKnown RBP20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 UBE2KP61086 200 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 BRCA1P38398 1863 aaKnown RBP20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 ZNF816-ZNF321PA0A0X1KG74 233 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 PTAFRP25105 342 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 FOXL2P58012 376 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 ST3GAL2Q16842 350 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 DTWD2Q8NBA8 298 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 RTN4IP1Q8WWV3 396 aaPredicted RBP20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 SLC23A1Q9UHI7 598 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 V9GYH0 126 aa20.04■□□□□ 0.8
CTDSPL-206ENST00000443503 OGG1O15527 345 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 CTAG2O75638 210 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 DUSP1P28562 367 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 OR1C1Q15619 314 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 ZNF770Q6IQ21 691 aaPredicted RBP20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 DGAT2L6Q6ZPD8 337 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 Q7L0L9 218 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 TRILQ7L0X0 811 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 ZDHHC23Q8IYP9 409 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 HEYLQ9NQ87 328 aaPredicted RBP20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 HBE1P02100 147 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 CCL4P13236 92 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 SKP2Q13309 424 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 CST9LP1Q5W188 147 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 OSR2Q8N2R0 312 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 OR2AE1Q8NHA4 323 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 SLC39A9Q9NUM3 307 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 OCIAD1Q9NX40 245 aa20.03■□□□□ 0.8
CTDSPL-206ENST00000443503 PRELID3BQ9Y3B1 194 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms