RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SLC25A45Q8N413 288 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 ARRDC1Q8N5I2 433 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 OR5AP2Q8NGF4 316 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 OR8B12Q8NGG6 310 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 OR5L2Q8NGL0 311 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 OR2I1PQ8NGU4 316 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 DCUN1D4Q92564 292 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 TMEM59Q9BXS4 323 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 GPR84Q9NQS5 396 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 A0A0A6YYD4 124 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 SOCS1O15524 211 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 CDC14BO60729 498 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 OPN1LWP04000 364 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 HCKP08631 526 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 ZNF121P58317 390 aaPredicted RBP14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 MFAP5Q13361 173 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 SMAD2Q15796 467 aaKnown RBP14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 FAM189A2Q15884 450 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 ACTBL2Q562R1 376 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 SLC25A53Q5H9E4 307 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 PLAC9Q5JTB6 97 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 NAA40Q86UY6 237 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 OR5AS1Q8N127 324 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 FAM71F1Q96KD3 344 aaPredicted RBP14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 GPER1Q99527 375 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 SOX7Q9BT81 388 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 METTL7AQ9H8H3 244 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 CA14Q9ULX7 337 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 KCNAB3O43448 404 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 OR3A4PP47883 348 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 NKAIN1Q4KMZ8 207 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 VAX1Q5SQQ9 334 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 FAM69BQ5VUD6 431 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 CARD17Q5XLA6 110 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 RABEPKQ7Z6M1 372 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 SLC38A9Q8NBW4 561 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 ADPRHL1Q8NDY3 354 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 POC1BQ8TC44 478 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 RNF138Q8WVD3 245 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 PIK3IP1Q96FE7 263 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 FAM117AQ9C073 453 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 BANF2Q9H503 90 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 APOC1P02654 83 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 TPT1P13693 172 aaKnown RBP14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 ARHGDIBP52566 201 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 TMPRSS9Q7Z410 1059 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 BOLLQ8N9W6 283 aaKnown RBP14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 OR1S2Q8NGQ3 325 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 STOML3Q8TAV4 291 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 C1orf147Q96MC9 270 aaPredicted RBP14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 NKX6-2Q9C056 277 aaPredicted RBP14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 GPR132Q9UNW8 380 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 WIF1Q9Y5W5 379 aa14.59□□□□□ -0.07
SEMA3B-207ENST00000441915 RAB19A4D1S5 217 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 GFOD2Q3B7J2 385 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 ZNF600Q6ZNG1 722 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 GTPBP8Q8N3Z3 284 aaPredicted RBP14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 OR56B1Q8NGI3 324 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 OR5B2Q96R09 309 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 CDC6Q99741 560 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 URM1Q9BTM9 101 aaKnown RBP14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 C5orf66Q9H5L9 145 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 ASF1BQ9NVP2 202 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 COA4Q9NYJ1 87 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 ANAPC10Q9UM13 185 aa14.58□□□□□ -0.07
SEMA3B-207ENST00000441915 TEX13DA0A0J9YY54 714 aaPredicted RBP14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 A0A1W2PNR3 127 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 MPTX1A8MV57 137 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 RER1O15258 196 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 SIGLEC6O43699 453 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 TRAF3IP2O43734 574 aaPredicted RBP14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 ZNF43P17038 809 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 NPY4RP50391 375 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 TMEM50BP56557 158 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 COL19A1Q14993 1142 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 PNLIPRP3Q17RR3 467 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 SCGB3A2Q96PL1 93 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 ZNF319Q9P2F9 582 aa14.58□□□□□ -0.08
SEMA3B-207ENST00000441915 ASCC3Q8N3C0 2202 aaKnown RBP14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 TRBV6-7A0A0A0MS04 114 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 CRTAPO75718 401 aaPredicted RBP14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 ZNF17P17021 662 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 P2RY4P51582 365 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 ARFRP1Q13795 201 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 PABPC1L2AQ5JQF8 200 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 SLC25A47Q6Q0C1 308 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 OR10G3Q8NGC4 313 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 OR6X1Q8NH79 312 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 MYOTQ9UBF9 498 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 A0A1W2PP11 408 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 CEACAM18A8MTB9 384 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 F8VVB4 439 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 F8VWA3 439 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 ACY1Q03154 408 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 SMAD4Q13485 552 aaKnown RBP14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 CCDC157Q569K6 752 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 FAM209BQ5JX69 171 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 DOK3Q7L591 496 aa14.57□□□□□ -0.08
SEMA3B-207ENST00000441915 BAP18Q8IXM2 172 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms