RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CSRP3P50461 194 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 MFAP2P55001 183 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 TMEM50BP56557 158 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 PRPSAP1Q14558 356 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 LAGE3Q14657 143 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 TMEM176BQ3YBM2 270 aaPredicted RBP3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 C14orf28Q4W4Y0 310 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 MS4A13Q5J8X5 152 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 C9orf64Q5T6V5 341 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 PVRIGQ6DKI7 326 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 NIPAL1Q6NVV3 410 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 SCIMPQ6UWF3 145 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 ENPP6Q6UWR7 440 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 TMEM179Q6ZVK1 233 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 ANGPTL5Q86XS5 388 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 RIMKLAQ8IXN7 391 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 KIR3DL3Q8N743 410 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 LRRC52Q8N7C0 313 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 LFNGQ8NES3 379 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR11H1Q8NG94 326 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR4D9Q8NGE8 314 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR2Y1Q8NGV0 311 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR11H2Q8NH07 326 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR51A7Q8NH64 312 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR2AE1Q8NHA4 323 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 RFESDQ8TAC1 157 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 TLCD1Q96CP7 247 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 CXorf40BQ96DE9 158 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 WBP1Q96G27 269 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 SFRP2Q96HF1 295 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 SYT4Q9H2B2 425 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF391Q9UJN7 358 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 NTNG1Q9Y2I2 539 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 FRMPD3Q5JV73 1810 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 CLTCQ00610 1675 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 ABCB11O95342 1321 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 BRWD3Q6RI45 1802 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 ATRNO75882 1429 aa3.33□□□□□ -1.88
CDC42BPA-207ENST00000441725 ITSN2Q9NZM3 1697 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 KIR2DL5BA0A0G2JN68 375 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 KIR2DL5BA0A0G2JPC4 375 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TEX48A0A1B0GUV7 120 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TVP23AA6NH52 213 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 C21orf140B9A014 251 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 F5H6K3 240 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 J3QLI3 93 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 FCN1O00602 326 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 RGS16O15492 202 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 FGF16O43320 207 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 FARS2O95363 451 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 HOXC4P09017 264 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF35P13682 527 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF25P17030 456 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ANOS1P23352 680 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 GNRHRP30968 328 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 CCKARP32238 428 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 FOXN2P32314 431 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 LIM2P55344 173 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TAS2R41P59536 307 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 DNAJB13P59910 316 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 RAP1BP61224 184 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 RPEL1Q2QD12 228 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC22A6Q4U2R8 563 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 C22orf42Q6IC83 251 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 CASP12Q6UXS9 341 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 IFNEQ86WN2 208 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 RAB43Q86YS6 212 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 KIR2DL5AQ8N109 375 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 LGI3Q8N145 548 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ARRDC1Q8N5I2 433 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 C15orf54Q8N8G6 183 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 AQP11Q8NBQ7 271 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ST6GALNAC3Q8NDV1 305 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR10G3Q8NGC4 313 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 KIR2DL5BQ8NHK3 375 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 FLYWCH2Q96CP2 140 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 AIF1LQ9BQI0 150 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TCEAL7Q9BRU2 100 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 CDCA4Q9BXL8 241 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ING2Q9H160 280 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TLNRD1Q9H1K6 362 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 WDR13Q9H1Z4 485 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 MOB1AQ9H8S9 216 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 TMEM27Q9HBJ8 222 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 POPDC2Q9HBU9 364 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 NIT2Q9NQR4 276 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 NUDT4Q9NZJ9 180 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 VPREB3Q9UKI3 123 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 UNC13BO14795 1591 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 KIF15Q9NS87 1388 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 AHDC1Q5TGY3 1603 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 YLPM1P49750 1951 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 PSMB11A5LHX3 300 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 CDIPTO14735 213 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 SHOX2O60902 331 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ATP5LO75964 103 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 ORM1P02763 201 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 MUC1P15941 1255 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 MGMTP16455 207 aa3.32□□□□□ -1.88
CDC42BPA-207ENST00000441725 AKR1C4P17516 323 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms