RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 NAXEQ8NCW5 288 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 ELP5Q8TE02 316 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 RRNAD1Q96FB5 475 aaKnown RBP11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 UQCC2Q9BRT2 126 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 C5orf66Q9H5L9 145 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 MYOZ1Q9NP98 299 aaPredicted RBP11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 SLC2A8Q9NY64 477 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 WIF1Q9Y5W5 379 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 A0A1W2PQM1 296 aa11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 ZNF726A6NNF4 738 aa11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 PPIAP62937 165 aaKnown RBP11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 MOB3CQ70IA8 216 aa11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 TERB2Q8NHR7 220 aa11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 C1orf147Q96MC9 270 aaPredicted RBP11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 JSRP1Q96MG2 331 aaPredicted RBP11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 LDAHQ9H6V9 325 aa11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 OR2S2Q9NQN1 319 aa11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 GSKIPQ9P0R6 139 aa11.96□□□□□ -0.49
HERPUD1-204ENST00000439977 H0YIZ8 118 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 TSPAN9O75954 239 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF205O95201 554 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 DUS4LO95620 317 aaKnown RBP11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 IL2RAP01589 272 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 PSMB6P28072 239 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 P2RY4P51582 365 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 DCDP81605 110 aaKnown RBP11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 PAN3Q58A45 887 aaKnown RBP11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 LPCAT3Q6P1A2 487 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 TMEM88Q6PEY1 159 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 WDR74Q6RFH5 385 aaPredicted RBP11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 CPEB2Q7Z5Q1 589 aaKnown RBP11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 ZDHHC22Q8N966 263 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 NUBPLQ8TB37 319 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 TMED6Q8WW62 240 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 MRGPRX4Q96LA9 322 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 GNRHR2Q96P88 292 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF416Q9BWM5 594 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 PHF7Q9BWX1 381 aaPredicted RBP11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 SRPK3Q9UPE1 567 aa11.96□□□□□ -0.5
HERPUD1-204ENST00000439977 MSGN1A6NI15 193 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 WDPCPO95876 746 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 KNG1P01042 644 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 CRHP06850 196 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 SLC25A4P12235 298 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 HIST1H1DP16402 221 aaKnown RBP11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 SERPINA2P20848 420 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 GLRA1P23415 457 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 CCL7P80098 99 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 WDSUB1Q8N9V3 476 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 OR4K17Q8NGC6 315 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 OR51T1Q8NGJ9 327 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 RASL10BQ96S79 203 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 TGIF2Q9GZN2 237 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 TMEM231Q9H6L2 316 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 OR5H15A6NDH6 313 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 GP1BAP07359 652 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 DBHP09172 617 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 SRSF3P84103 164 aaKnown RBP11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 SHBQ15464 509 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 TMEM71Q6P5X7 295 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 CLEC18BQ6UXF7 455 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 HOGA1Q86XE5 327 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 OR5AP2Q8NGF4 316 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 TMEM230Q96A57 120 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 DEFB126Q9BYW3 111 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 ACKR4Q9NPB9 350 aa11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF107Q9UII5 783 aaPredicted RBP11.95□□□□□ -0.5
HERPUD1-204ENST00000439977 STMND1H3BQB6 276 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 GPR31O00270 319 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 ZFAND5O76080 213 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 F12P00748 615 aaPredicted RBP11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 HOXB5P09067 269 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 FAHP16930 419 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 AMY2BP19961 511 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF345Q14585 488 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 ZSCAN4Q8NAM6 433 aaPredicted RBP11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 PIGTQ969N2 578 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 SPSB2Q99619 263 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 ARPC5LQ9BPX5 153 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 RNF126Q9BV68 326 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 PNRC2Q9NPJ4 139 aaKnown RBP11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 OR5AC2Q9NZP5 309 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 PHYHD1Q5SRE7 291 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF529Q6P280 563 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 DTWD2Q8NBA8 298 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 OR2M3Q8NG83 312 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 OR5L2Q8NGL0 311 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 OR51F2Q8NH61 342 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 KCNG3Q8TAE7 436 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 PGAM5Q96HS1 289 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 UCN2Q96RP3 112 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 METTL8Q9H825 291 aaKnown RBP11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 RARRES3Q9UL19 164 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 LHX6Q9UPM6 363 aa11.94□□□□□ -0.5
HERPUD1-204ENST00000439977 A0A1W2PNV4 684 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 TOR1AO14656 332 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 BET1O15155 118 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 ICAM2P13598 275 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 OR3A2P47893 321 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms