RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 PCDHGB1Q9Y5G3 927 aa16.49■□□□□ 0.23
SEMA3B-206ENST00000439487 IGHV4-61A0A0C4DH41 118 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 IGHV3-64DA0A0J9YX35 117 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 A0A1B0GWJ7 208 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 PPIHO43447 177 aaKnown RBP16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 SULT1C4O75897 302 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 ATP6V1G2O95670 118 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 DDOSTP39656 456 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 AQP4P55087 323 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 TMEM33P57088 247 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 LOXL1Q08397 574 aaPredicted RBP16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 OR8G1Q15617 311 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 HFEQ30201 348 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 LIPNQ5VXI9 398 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 ACBD7Q8N6N7 88 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 MRPS18AQ9NVS2 196 aaKnown RBP16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 NUFIP1Q9UHK0 495 aaKnown RBP16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 GNG8Q9UK08 70 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 OR52A1Q9UKL2 312 aa16.48■□□□□ 0.23
SEMA3B-206ENST00000439487 DOCK11Q5JSL3 2073 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 A0A0U1RQV5 110 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 ANKRD30BLA7E2S9 258 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 TTRP02766 147 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 TNFRSF1AP19438 455 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 SRP9P49458 86 aaKnown RBP16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 RAB40BQ12829 278 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 RIPK1Q13546 671 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 OR8B8Q15620 311 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 C6orf52Q5T4I8 152 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 BCL2L15Q5TBC7 163 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 BIVMQ86UB2 503 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 LHFPL3Q86UP9 236 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 C8orf59Q8N0T1 100 aaPredicted RBP16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 OR52I1Q8NGK6 324 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 OR51E1Q8TCB6 317 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 TFAP2CQ92754 450 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 ADAT1Q9BUB4 502 aaKnown RBP16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 SLC22A4Q9H015 551 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 GPR84Q9NQS5 396 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 DCAF16Q9NXF7 216 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 SLC22A13Q9Y226 551 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 SNX5Q9Y5X3 404 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 HSPE1-MOB4S4R3N1 261 aa16.47■□□□□ 0.23
SEMA3B-206ENST00000439487 GMDSO60547 372 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 FADS2O95864 444 aaKnown RBP16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 LY6G6DO95868 133 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 ACKR3P25106 362 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 PSMB10P40306 273 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 MAB21L1Q13394 359 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 CDONQ4KMG0 1287 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 KLHL22Q53GT1 634 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 AVPI1Q5T686 147 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 FAM220AQ7Z4H9 259 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 COMMD2Q86X83 199 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 RORBQ92753 470 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 FAM71F1Q96KD3 344 aaPredicted RBP16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 PPP1R3EQ9H7J1 279 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 MOB1AQ9H8S9 216 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 ACOXLQ9NUZ1 547 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 ZNF391Q9UJN7 358 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 RHBDD3Q9Y3P4 386 aa16.46■□□□□ 0.23
SEMA3B-206ENST00000439487 SONP18583 2426 aaKnown RBP16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 LRP5LA4QPB2 252 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 CLDN25C9JDP6 229 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 H0YJX3 145 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 WNT9BO14905 357 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 FAM20BO75063 409 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 IGLV3-1P01715 115 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 IGHA1P01876 353 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 CD200P41217 278 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 OR12D2P58182 307 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 MVKQ03426 396 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 ODF4Q2M2E3 257 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 PRAMEF6Q5VXH4 476 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 CLEC9AQ6UXN8 241 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 MOGAT3Q86VF5 341 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 CATSPERDQ86XM0 798 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 ELMOD2Q8IZ81 293 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 CSNK2A3Q8NEV1 391 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 ZNF420Q8TAQ5 688 aaPredicted RBP16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 ALG8Q9BVK2 526 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 NARFLQ9H6Q4 476 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 GCM1Q9NP62 436 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 FGF20Q9NP95 211 aaPredicted RBP16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 TMEM106BQ9NUM4 274 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 PPP1R3CQ9UQK1 317 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 NOP16Q9Y3C1 178 aaKnown RBP16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 ARHGAP32A7KAX9 2087 aa16.45■□□□□ 0.22
SEMA3B-206ENST00000439487 WNK2Q9Y3S1 2297 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 J3QLW9 94 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 P2RY10O00398 339 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 TACSTD2P09758 323 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 ZNF19P17023 458 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 MAP2K3P46734 347 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 GALEQ14376 348 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 TMEM249Q2WGJ8 235 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 LAIR2Q6ISS4 152 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 Q71RC1 249 aaPredicted RBP16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 KCTD20Q7Z5Y7 419 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 RNF166Q96A37 237 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms