RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 HRH4Q9H3N8 390 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 FADS1O60427 444 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 PDGFAP04085 211 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 DUSP1P28562 367 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 IFITM3Q01628 133 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 DMKNQ6E0U4 476 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-205ENST00000439160 OR10R2Q8NGX6 335 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 SAP25Q8TEE9 199 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 OIT3Q8WWZ8 545 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 PBDC1Q9BVG4 233 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 SPACA1Q9HBV2 294 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 KCNE5Q9UJ90 142 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 MED12Q93074 2177 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 A0A1W2PQM1 296 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 SIRPB1O00241 398 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 RAC3P60763 192 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 RPL19P84098 196 aaKnown RBP10.97□□□□□ -0.65
TCOF1-205ENST00000439160 LPCAT3Q6P1A2 487 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 DEGS2Q6QHC5 323 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 OR5T1Q8NG75 326 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 SULT4A1Q9BR01 284 aa10.97□□□□□ -0.65
TCOF1-205ENST00000439160 MPPED1O15442 326 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 NXPH3O95157 252 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 LHFPL2Q6ZUX7 228 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 WFDC8Q8IUA0 241 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 ZPLD1Q8TCW7 415 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 PP6455Q8WZ26 134 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 UCN2Q96RP3 112 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 TAS2R5Q9NYW4 299 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 KIR2DS1A0A191URI9 304 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 HSD17B6O14756 317 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 HPP00738 406 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 IGHA1P01876 353 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 MSL3P1P0C860 447 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 KIR2DS4P43632 304 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 KIR2DS1Q14954 304 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 PDCD1Q15116 288 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 INPP5JQ15735 1006 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-205ENST00000439160 ISXQ2M1V0 245 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 ESCO2Q56NI9 601 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 TFAP2EQ6VUC0 442 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 ZDHHC23Q8IYP9 409 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 MARCH1Q8TCQ1 289 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 SLAMF9Q96A28 289 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 DECR2Q9NUI1 292 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 OR5V1Q9UGF6 321 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 PILRBQ9UKJ0 227 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 POLDIP2Q9Y2S7 368 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 DOCK8Q8NF50 2099 aa10.96□□□□□ -0.65
TCOF1-205ENST00000439160 ROS1P08922 2347 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 A0A0D9SG52 128 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF816-ZNF321PA0A0X1KG74 233 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 M0R1B8 84 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 GPR137BO60478 399 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 CCL2P13500 99 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 GALP22466 123 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 NFYBP25208 207 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 MSMO1Q15800 293 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 C3AR1Q16581 482 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 PABPC1L2AQ5JQF8 200 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 RFPL4BQ6ZWI9 263 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 DMBX1Q8NFW5 382 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 H1FXQ92522 213 aaKnown RBP10.96□□□□□ -0.66
TCOF1-205ENST00000439160 CMBLQ96DG6 245 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 SDSLQ96GA7 329 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF285Q96NJ3 590 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 FOXJ3Q9UPW0 622 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 TRGV8A0A0C4DH27 118 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF732B4DXR9 585 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 PNLIPP16233 465 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 AVPR2P30518 371 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 MMP15P51511 669 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 LINC00303Q3SY05 128 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF573Q86YE8 665 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 FBXL14Q8N1E6 418 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 GPR87Q9BY21 358 aa10.96□□□□□ -0.66
TCOF1-205ENST00000439160 CLDN20P56880 219 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 GSG1Q2KHT4 349 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 OR52W1Q6IF63 320 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 JMJD6Q6NYC1 403 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-205ENST00000439160 DRAM2Q6UX65 266 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 MRGPREQ86SM8 312 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 OR6X1Q8NH79 312 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 ASB10Q8WXI3 467 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 KISS1RQ969F8 398 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-205ENST00000439160 WDR1O75083 606 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 C1QBP02746 253 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 OR5H8P0DN80 308 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 PPP3CBP16298 524 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 CNR1P21554 472 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 PTAFRP25105 342 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 S100A11P31949 105 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 PTGER4P35408 488 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 GZMKP49863 264 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 SELENOPP49908 381 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 PLA2G7Q13093 441 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 RAB35Q15286 201 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 SLC25A30Q5SVS4 291 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 CREB3L2Q70SY1 520 aa10.95□□□□□ -0.66
TCOF1-205ENST00000439160 OR1J1Q8NGS3 322 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms