RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 LIMS3P0CW19 117 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 LIMS4P0CW20 117 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 LYNX1P0DP58 116 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 ZNF19P17023 458 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 MYL12AP19105 171 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 DCKP27707 260 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 DSCR9P59020 149 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 TNK1Q13470 666 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 SNCBQ16143 134 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 SPRNQ5BIV9 151 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 WDR38Q5JTN6 314 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 AHSA2Q719I0 299 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 KCTD20Q7Z5Y7 419 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 ELMOD2Q8IZ81 293 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 SYS1Q8N2H4 156 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 C10orf105Q8TEF2 133 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 GGHQ92820 318 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 DVL3Q92997 716 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-203ENST00000439080 YIPF5Q969M3 257 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 RNF166Q96A37 237 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-203ENST00000439080 FAM71F1Q96KD3 344 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-203ENST00000439080 OR2V2Q96R30 315 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 EGLN1Q9GZT9 426 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 ISG20L2Q9H9L3 353 aaKnown RBP14.35□□□□□ -0.11
TARDBP-203ENST00000439080 PLCXD1Q9NUJ7 323 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 CNOT2Q9NZN8 540 aaKnown RBP14.35□□□□□ -0.11
TARDBP-203ENST00000439080 PSORS1C1Q9UIG5 152 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 SLC22A13Q9Y226 551 aa14.35□□□□□ -0.11
TARDBP-203ENST00000439080 LOC390937A0A1W2PQ73 354 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 ANKRD30BLA7E2S9 258 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 CDC14BO60729 498 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 CA6P23280 308 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 ACKR3P25106 362 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 DDOSTP39656 456 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 ETV1P50549 477 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 MRPS11P82912 194 aaKnown RBP14.34□□□□□ -0.11
TARDBP-203ENST00000439080 ODF4Q2M2E3 257 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 ZNF786Q8N393 782 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 PRSS35Q8N3Z0 413 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 FTMTQ8N4E7 242 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 CSNK2A3Q8NEV1 391 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 RDH5Q92781 318 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 PELI1Q96FA3 418 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 TMEM80Q96HE8 168 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 CNBD2Q96M20 576 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 PIMREGQ9BSJ6 248 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 EXOSC1Q9Y3B2 195 aaKnown RBP14.34□□□□□ -0.11
TARDBP-203ENST00000439080 IGHV1-69-2A0A0G2JMI3 117 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 F5H5P2 479 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 NDUFS8O00217 210 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 P2RY10O00398 339 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 RP2O75695 350 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 ACHEP22303 614 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 KIR3DL2P43630 455 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 MVKQ03426 396 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 ST3GAL4Q11206 333 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 OR8G1Q15617 311 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 C6orf141Q5SZD1 244 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 OR2G2Q8NGZ5 317 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 ITLN1Q8WWA0 313 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 PAPOLGQ9BWT3 736 aaKnown RBP14.34□□□□□ -0.11
TARDBP-203ENST00000439080 SLC22A4Q9H015 551 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 CHODLQ9H9P2 273 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 IL19Q9UHD0 177 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 NOP16Q9Y3C1 178 aaKnown RBP14.34□□□□□ -0.11
TARDBP-203ENST00000439080 CACNG2Q9Y698 323 aa14.34□□□□□ -0.11
TARDBP-203ENST00000439080 ZANQ9Y493 2812 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 DHRS3O75911 302 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 HTR1AP08908 422 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 UBCP0CG48 685 aaKnown RBP14.33□□□□□ -0.12
TARDBP-203ENST00000439080 TNFRSF1AP19438 455 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 COL8A2P25067 703 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 CRYBB2P43320 205 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 NANOS3P60323 173 aaKnown RBP14.33□□□□□ -0.12
TARDBP-203ENST00000439080 STX19Q8N4C7 294 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 KLHL36Q8N4N3 616 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 ZNF540Q8NDQ6 660 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 MEGF10Q96KG7 1140 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 ZNF275Q9NSD4 429 aaPredicted RBP14.33□□□□□ -0.12
TARDBP-203ENST00000439080 FKBP14Q9NWM8 211 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 TREM2Q9NZC2 230 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 RHBDD3Q9Y3P4 386 aa14.33□□□□□ -0.12
TARDBP-203ENST00000439080 A0A1B0GTI1 187 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 RNF223E7ERA6 249 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 H3BSH0 61 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 H7C1Q1 480 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 GMDSO60547 372 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 ATP6V1B1P15313 513 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 SLC25A16P16260 332 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 CCL1P22362 96 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 GNALP38405 381 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 CD200P41217 278 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 MAP2K3P46734 347 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 SRP9P49458 86 aaKnown RBP14.32□□□□□ -0.12
TARDBP-203ENST00000439080 HNRNPA0Q13151 305 aaKnown RBP14.32□□□□□ -0.12
TARDBP-203ENST00000439080 MED21Q13503 144 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 OR2G6Q5TZ20 316 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 FDX2Q6P4F2 183 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 DOK3Q7L591 496 aa14.32□□□□□ -0.12
TARDBP-203ENST00000439080 SEMA6DQ8NFY4 1073 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms