RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 RUSC1-AS1Q66K80 236 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 SFRP4Q6FHJ7 346 aaPredicted RBP6.45□□□□□ -1.38
VPS50-204ENST00000438395 DRAM2Q6UX65 266 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 LYPD2Q6UXB3 125 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 ZNF620Q6ZNG0 422 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 TSEN54Q7Z6J9 526 aaKnown RBP6.45□□□□□ -1.38
VPS50-204ENST00000438395 ZBTB46Q86UZ6 589 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 CMTM4Q8IZR5 234 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 CYB561A3Q8NBI2 242 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 OR56B2PQ8NGI1 322 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 OR2AE1Q8NHA4 323 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 TBC1D15Q8TC07 691 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 GNPDA2Q8TDQ7 276 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 ST8SIA4Q92187 359 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 C7orf34Q96L11 122 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 WDFY2Q96P53 400 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 CHIAQ9BZP6 476 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 SP140LQ9H930 580 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 MED4Q9NPJ6 270 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 CENPMQ9NSP4 180 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 TBC1D23Q9NUY8 699 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 ACOXLQ9NUZ1 547 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 NDE1Q9NXR1 346 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 MRPL15Q9P015 296 aaKnown RBP6.45□□□□□ -1.38
VPS50-204ENST00000438395 ONECUT1Q9UBC0 465 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 CAB39Q9Y376 341 aaPredicted RBP6.45□□□□□ -1.38
VPS50-204ENST00000438395 MMP24Q9Y5R2 645 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 CDH10Q9Y6N8 788 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 IGHV1-69DA0A0B4J2H0 117 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 A0A1B0GWJ7 208 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 OR6C68A6NDL8 312 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 TVP23AA6NH52 213 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 NKX6-3A6NJ46 265 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 ZNF878C9JN71 531 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 ARPC2O15144 300 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 KRT36O76013 467 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 NDUFA7O95182 113 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 ECDO95905 644 aaPredicted RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 PAHP00439 452 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 IFNGP01579 166 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 IGHV1-69P01742 117 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 GYPAP02724 150 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 ANXA2P07355 339 aaKnown RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 SFTPBP07988 381 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 MELTFP08582 738 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 CFL1P23528 166 aaKnown RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 EEF1B2P24534 225 aaKnown RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 HSD11B1P28845 292 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 FMO3P31513 532 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 DDOSTP39656 456 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 PSMB10P40306 273 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 PMELP40967 661 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 GSSP48637 474 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 BLVRAP53004 296 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 TSPAN31Q12999 210 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 SNCBQ16143 134 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 MICBQ29980 383 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 GFOD2Q3B7J2 385 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 KRTAP27-1Q3LI81 207 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 PDLIM3Q53GG5 364 aaPredicted RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 GLYATL3Q5SZD4 288 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 OLFML2AQ68BL7 652 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 C8orf82Q6P1X6 216 aaPredicted RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 SLC36A1Q7Z2H8 476 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 DCXRQ7Z4W1 244 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 CPLX4Q7Z7G2 160 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 ZDHHC21Q8IVQ6 265 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 LINC00471Q8N535 108 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 KIR3DL3Q8N743 410 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 OR9Q1Q8NGQ5 310 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 OR6K6Q8NGW6 343 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 LRTOMTQ8WZ04 291 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 LHX4Q969G2 390 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 DACT3Q96B18 629 aaPredicted RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 MAP6Q96JE9 813 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 ELAC2Q9BQ52 826 aaKnown RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 FUZQ9BT04 418 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 PAPOLGQ9BWT3 736 aaKnown RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 DPAGT1Q9H3H5 408 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 GORASP2Q9H8Y8 452 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 IL1RAPQ9NPH3 570 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 SOX21Q9Y651 276 aaPredicted RBP6.44□□□□□ -1.38
VPS50-204ENST00000438395 COMMD3-BMI1R4GMX3 469 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 WNK1Q9H4A3 2382 aa6.44□□□□□ -1.38
VPS50-204ENST00000438395 A0A1B0GVI7 797 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 CLPSL1A2RUU4 121 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 ANXA2P2A6NMY6 339 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 TNFRSF11BO00300 401 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 DVL1O14640 695 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 TNFRSF13BO14836 293 aaPredicted RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 GPR137BO60478 399 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 TIPRLO75663 272 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 APOC1P02654 83 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 FBP1P09467 338 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 SLC2A1P11166 492 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 HSD17B1P14061 328 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 ZNF3P17036 446 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 PAICSP22234 425 aaKnown RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 NAA10P41227 235 aaPredicted RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 ENTPD1P49961 510 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms