RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 SPTSSAQ969W0 71 aa11.13□□□□□ -0.63
LINC00028-201ENST00000435497 DMRTB1Q96MA1 342 aa11.13□□□□□ -0.63
LINC00028-201ENST00000435497 VIPAS39Q9H9C1 493 aa11.13□□□□□ -0.63
LINC00028-201ENST00000435497 CAB39Q9Y376 341 aaPredicted RBP11.13□□□□□ -0.63
LINC00028-201ENST00000435497 ACOT8O14734 319 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 GPR37O15354 613 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 MUC1P15941 1255 aaPredicted RBP11.12□□□□□ -0.63
LINC00028-201ENST00000435497 SLC6A6P31641 620 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 PYCR1P32322 319 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 TGM4P49221 684 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 HERPUD1Q15011 391 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 MICBQ29980 383 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 LYPD4Q6UWN0 246 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 DRAM2Q6UX65 266 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 ARPINQ7Z6K5 226 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 LNX2Q8N448 690 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 GALNT4Q8N4A0 578 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 FAM86B1Q8N7N1 296 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 FANK1Q8TC84 345 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 LRRC29Q8WV35 223 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 FAM162AQ96A26 154 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 DCTN5Q9BTE1 182 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 IFT27Q9BW83 186 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 PPA2Q9H2U2 334 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 PPP1R3EQ9H7J1 279 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 RNPEPL1Q9HAU8 725 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 C14orf119Q9NWQ9 140 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 KCNG2Q9UJ96 466 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
LINC00028-201ENST00000435497 FOXJ3Q9UPW0 622 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 FAM32AQ9Y421 112 aaKnown RBP11.12□□□□□ -0.63
LINC00028-201ENST00000435497 CAPN7Q9Y6W3 813 aa11.12□□□□□ -0.63
LINC00028-201ENST00000435497 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.11□□□□□ -0.63
LINC00028-201ENST00000435497 BTBD17A6NE02 478 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 TVP23AA6NH52 213 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 SLC2A1P11166 492 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 SELLP14151 372 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 ZNF823P16415 610 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 PRKXP51817 358 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 EFNB2P52799 333 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 CSNK2BP67870 215 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 GUCA2AQ02747 115 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 FAM189A2Q15884 450 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 SLC35F1Q5T1Q4 408 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 WDR82Q6UXN9 313 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 C1orf122Q6ZSJ8 110 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 C11orf44Q8N8P7 122 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 OR1M1Q8NGA1 313 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 OR5R1Q8NH85 324 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 RP9Q8TA86 221 aaKnown RBP11.11□□□□□ -0.63
LINC00028-201ENST00000435497 C8orf46Q8TAG6 207 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 C17orf50Q8WW18 174 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 CFHR4Q92496 578 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 SPSB4Q96A44 273 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 AJUBAQ96IF1 538 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 HOPXQ9BPY8 73 aaPredicted RBP11.11□□□□□ -0.63
LINC00028-201ENST00000435497 FGFR1OP2Q9NVK5 253 aa11.11□□□□□ -0.63
LINC00028-201ENST00000435497 MEIOCA2RUB1 952 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 MEGF11A6BM72 1044 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 ANKRD61A6NGH8 418 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 IDH3BO43837 385 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 COX4I1P13073 169 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 EEF1B2P24534 225 aaKnown RBP11.1□□□□□ -0.63
LINC00028-201ENST00000435497 NOS3P29474 1203 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 GABRA5P31644 462 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 SAA4P35542 130 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 KIR2DS4P43632 304 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 FAM3AP98173 230 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00028-201ENST00000435497 MZT1Q08AG7 82 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 IKZF1Q13422 519 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 ATPAF1Q5TC12 328 aaPredicted RBP11.1□□□□□ -0.63
LINC00028-201ENST00000435497 Q6ZTK2 550 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 SLC36A1Q7Z2H8 476 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 DPY19L4Q7Z388 723 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 DCXRQ7Z4W1 244 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 CMTM4Q8IZR5 234 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 CYB561A3Q8NBI2 242 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 OR5T2Q8NGG2 359 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 KCNJ15Q99712 375 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 NSRP1Q9H0G5 558 aaKnown RBP11.1□□□□□ -0.63
LINC00028-201ENST00000435497 KRCC1Q9NPI7 259 aaPredicted RBP11.1□□□□□ -0.63
LINC00028-201ENST00000435497 N6AMT1Q9Y5N5 214 aa11.1□□□□□ -0.63
LINC00028-201ENST00000435497 SLC22A2O15244 555 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 PIN1P1O15428 100 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 NDUFB3O43676 98 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 TFF1P04155 84 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 GRK5P34947 590 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 DDOSTP39656 456 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 GSSP48637 474 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 UBE2E1P51965 193 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 KLHL12Q53G59 568 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 STUMQ69YW2 141 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 GLYATQ6IB77 296 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 HCP5Q6MZN7 132 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 CRIP3Q6Q6R5 217 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 SLC16A9Q7RTY1 509 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 ZDHHC21Q8IVQ6 265 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 BEND2Q8NDZ0 799 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 OR51L1Q8NGJ5 315 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms