RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 C5orf63A6NC05 138 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 ZNF726A6NNF4 738 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 E9PLN8 166 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 TOX3O15405 576 aaPredicted RBP10.42□□□□□ -0.74
CD44-209ENST00000433892 CRTAPO75718 401 aaPredicted RBP10.42□□□□□ -0.74
CD44-209ENST00000433892 DUX4L2P0CJ85 424 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 DUX4L3P0CJ86 424 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 DUX4L4P0CJ87 422 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 DUX4L5P0CJ88 424 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 DUX4L6P0CJ89 424 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 DUX4L7P0CJ90 424 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 PI3P19957 117 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 ZNF273Q14593 569 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 ARMC10Q8N2F6 343 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 ZNF283Q8N7M2 679 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 WDSUB1Q8N9V3 476 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 OR5D18Q8NGL1 313 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 KCNG3Q8TAE7 436 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 ARHGAP5-AS1Q96IT6 56 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 RASL10BQ96S79 203 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 NUDT16L1Q9BRJ7 211 aaKnown RBP10.42□□□□□ -0.74
CD44-209ENST00000433892 TMEM59Q9BXS4 323 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 DUX4Q9UBX2 424 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 GLS2Q9UI32 602 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 RARRES3Q9UL19 164 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 ADAMTS9Q9P2N4 1935 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 A0A1W2PQM1 296 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 PSMB6P28072 239 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 CCL7P80098 99 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 SNTB1Q13884 538 aaKnown RBP10.42□□□□□ -0.74
CD44-209ENST00000433892 PAN3Q58A45 887 aaKnown RBP10.42□□□□□ -0.74
CD44-209ENST00000433892 TMPPEQ6ZT21 453 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 PGAP1Q75T13 922 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 NAA40Q86UY6 237 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 TDHQ8IZJ6 230 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 ADPRHL1Q8NDY3 354 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 TMEM185AQ8NFB2 350 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 OR4K17Q8NGC6 315 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 ELP5Q8TE02 316 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 NPRL2Q8WTW4 380 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 OXGR1Q96P68 337 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 CHMP1AQ9HD42 196 aaPredicted RBP10.42□□□□□ -0.74
CD44-209ENST00000433892 PRR13Q9NZ81 148 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 CSAG2Q9Y5P2 127 aa10.42□□□□□ -0.74
CD44-209ENST00000433892 MUC3AQ02505 3323 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 IGKV1-9A0A0C4DH69 117 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 DBX1A6NMT0 343 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 CRHP06850 196 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 GSTP1P09211 210 aaKnown RBP10.41□□□□□ -0.74
CD44-209ENST00000433892 PGAM2P15259 253 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 PPIAP62937 165 aaKnown RBP10.41□□□□□ -0.74
CD44-209ENST00000433892 DEFA5Q01523 94 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 SGCAQ16586 387 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 BPIFCQ8NFQ6 507 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 SLC22A8Q8TCC7 542 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 ROBO4Q8WZ75 1007 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 SPACA9Q96E40 222 aaPredicted RBP10.41□□□□□ -0.74
CD44-209ENST00000433892 PHYHIPLQ96FC7 376 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 NARS2Q96I59 477 aaKnown RBP10.41□□□□□ -0.74
CD44-209ENST00000433892 DEFB126Q9BYW3 111 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 DNTTIP1Q9H147 329 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 C5orf66Q9H5L9 145 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 B3GALT1Q9Y5Z6 326 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 IGHV5-10-1A0A0J9YXX1 117 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 GDF9O60383 454 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 GP1BAP07359 652 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 CLDN17P56750 224 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 ARFRP1Q13795 201 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 SLC9A3R2Q15599 337 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 HIST3H3Q16695 136 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 TMEM128Q5BJH2 165 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 ZNF385CQ66K41 422 aaPredicted RBP10.41□□□□□ -0.74
CD44-209ENST00000433892 DOK3Q7L591 496 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 C1QL2Q7Z5L3 287 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 DCUN1D4Q92564 292 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 LIN37Q96GY3 246 aaPredicted RBP10.41□□□□□ -0.74
CD44-209ENST00000433892 ARPC5LQ9BPX5 153 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 ST6GALNAC5Q9BVH7 336 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 ZNF416Q9BWM5 594 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 ZC4H2Q9NQZ6 224 aa10.41□□□□□ -0.74
CD44-209ENST00000433892 WDFY4Q6ZS81 3184 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 NCOA6Q14686 2063 aaPredicted RBP10.4□□□□□ -0.74
CD44-209ENST00000433892 AQP7P3A6NL99 342 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 ADAP1O75689 374 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 TAS2R31P59538 309 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 SPEM1Q8N4L4 309 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 OR5AP2Q8NGF4 316 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 OR56B1Q8NGI3 324 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 OR52H1Q8NGJ2 320 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 TMEM230Q96A57 120 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 LRRC46Q96FV0 321 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 UBE2ZQ9H832 354 aaPredicted RBP10.4□□□□□ -0.74
CD44-209ENST00000433892 FSCN3Q9NQT6 498 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 GPR132Q9UNW8 380 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 PRELID1Q9Y255 219 aa10.4□□□□□ -0.74
CD44-209ENST00000433892 MPTX1A8MV57 137 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 F5H5K5 113 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 SDCBPO00560 298 aaPredicted RBP10.4□□□□□ -0.75
CD44-209ENST00000433892 MFNGO00587 321 aa10.4□□□□□ -0.75
CD44-209ENST00000433892 CELA2AP08217 269 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms