RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TRAV19A0A0A6YYK7 116 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 GOLGA8JA6NMD2 632 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 VGLL3A8MV65 326 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 MAGEB4O15481 346 aaPredicted RBP3.92□□□□□ -1.78
USP54-206ENST00000433394 NEMFO60524 1076 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 SEMA3DO95025 777 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 GOLGA8HP0CJ92 632 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 GFAPP14136 432 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 HOXB8P17481 243 aaPredicted RBP3.92□□□□□ -1.78
USP54-206ENST00000433394 RPS15AP62244 130 aaKnown RBP3.92□□□□□ -1.78
USP54-206ENST00000433394 KIR2DS1Q14954 304 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 AP1ARQ63HQ0 302 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 NCCRP1Q6ZVX7 275 aaPredicted RBP3.92□□□□□ -1.78
USP54-206ENST00000433394 CALHM1Q8IU99 346 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 COX18Q8N8Q8 333 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 ZFP41Q8N8Y5 198 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 LRRC75AQ8NAA5 344 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 ZNF596Q8TC21 504 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 ISOC2Q96AB3 205 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 KIAA1143Q96AT1 154 aaPredicted RBP3.92□□□□□ -1.78
USP54-206ENST00000433394 RCN3Q96D15 328 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 BTN2A3PQ96KV6 586 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 CAMK2N2Q96S95 79 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 ZNF382Q96SR6 550 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 TIMM17AQ99595 171 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 RBAKQ9NYW8 714 aaPredicted RBP3.92□□□□□ -1.78
USP54-206ENST00000433394 RAB26Q9ULW5 256 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 RHBDD3Q9Y3P4 386 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 TNS3Q68CZ2 1445 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 PXDNQ92626 1479 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 LTN1O94822 1766 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 NFAT5O94916 1531 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 LINC00854A0A1B0GVQ3 168 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 NCBP2LA6PVI3 153 aaKnown RBP3.91□□□□□ -1.78
USP54-206ENST00000433394 K7EMT4 169 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 MPDU1O75352 247 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 CCDC172P0C7W6 258 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 SSTR5P35346 364 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 TALDO1P37837 337 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 RBM34P42696 430 aaKnown RBP3.91□□□□□ -1.78
USP54-206ENST00000433394 CDKN2DP55273 166 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 SYNJ2BPP57105 145 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 RPS23P62266 143 aaKnown RBP3.91□□□□□ -1.78
USP54-206ENST00000433394 SARNPP82979 210 aaKnown RBP3.91□□□□□ -1.78
USP54-206ENST00000433394 KDSRQ06136 332 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 ZNF266Q14584 549 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 FAM78AQ5JUQ0 283 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 TPRG1LQ5T0D9 272 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 WDR82Q6UXN9 313 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 MRPL21Q7Z2W9 205 aaKnown RBP3.91□□□□□ -1.78
USP54-206ENST00000433394 C12orf56Q8IXR9 622 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 RPEQ96AT9 228 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 ZNF681Q96N22 645 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 HSD17B10Q99714 261 aaKnown RBP3.91□□□□□ -1.78
USP54-206ENST00000433394 NDFIP1Q9BT67 221 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 VCXQ9H320 206 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 RPP21Q9H633 154 aaKnown RBP3.91□□□□□ -1.78
USP54-206ENST00000433394 TBX21Q9UL17 535 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 FLVCR2Q9UPI3 526 aa3.91□□□□□ -1.78
USP54-206ENST00000433394 PRG3Q9Y2Y8 225 aaPredicted RBP3.91□□□□□ -1.78
USP54-206ENST00000433394 MARF1Q9Y4F3 1742 aaKnown RBP3.91□□□□□ -1.78
USP54-206ENST00000433394 RGPD1P0DJD0 1748 aa3.9□□□□□ -1.78
USP54-206ENST00000433394 IGLV1-36A0A0B4J1U3 117 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 IGHV5-10-1A0A0J9YXX1 117 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 A0A0J9YYE9 177 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 PDZK1P1A8MUH7 402 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 NME4O00746 187 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 POLR3GO15318 223 aaPredicted RBP3.9□□□□□ -1.79
USP54-206ENST00000433394 TRBC1P01850 177 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 GLAP06280 429 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 STAG3L2P0CL84 134 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 IGHV1-8P0DP01 117 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 SRMP19623 302 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 TCN2P20062 427 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 GABRR2P28476 465 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 PFN2P35080 140 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 OR1G1P47890 313 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 PON2Q15165 354 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 DEFB116Q30KQ4 102 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 CCDC122Q5T0U0 273 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 FBXW12Q6X9E4 464 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 FAM122BQ7Z309 247 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 SLC34A3Q8N130 599 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 TRAM1L1Q8N609 369 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 NPWQ8N729 165 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 FAM86B1Q8N7N1 296 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 OR51F2Q8NH61 342 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 COQ8AQ8NI60 647 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.9□□□□□ -1.79
USP54-206ENST00000433394 PDXPQ96GD0 296 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 PLA2G2FQ9BZM2 168 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 SAV1Q9H4B6 383 aaPredicted RBP3.9□□□□□ -1.79
USP54-206ENST00000433394 CD209Q9NNX6 404 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 MEGF6O75095 1541 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 CRYBG1Q9Y4K1 1723 aa3.9□□□□□ -1.79
USP54-206ENST00000433394 OVOS2A0A0G2JMS6 1433 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 A0A1W2PPV4 95 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 H7C417 338 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 M0QX08 132 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 GABRPO00591 440 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms