RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 IMPAD1Q9NX62 359 aa4.88□□□□□ -1.63
HMGB3P24-201ENST00000433260 UBAP1Q9NZ09 502 aa4.88□□□□□ -1.63
HMGB3P24-201ENST00000433260 USE1Q9NZ43 259 aa4.88□□□□□ -1.63
HMGB3P24-201ENST00000433260 IL19Q9UHD0 177 aa4.88□□□□□ -1.63
HMGB3P24-201ENST00000433260 ATPIF1Q9UII2 106 aa4.88□□□□□ -1.63
HMGB3P24-201ENST00000433260 PPP1R3CQ9UQK1 317 aa4.88□□□□□ -1.63
HMGB3P24-201ENST00000433260 LRP12Q9Y561 859 aa4.88□□□□□ -1.63
HMGB3P24-201ENST00000433260 GMPPBQ9Y5P6 360 aa4.88□□□□□ -1.63
HMGB3P24-201ENST00000433260 CSMD2Q7Z408 3487 aa4.88□□□□□ -1.63
HMGB3P24-201ENST00000433260 TANC2Q9HCD6 1990 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 NOTCH2Q04721 2471 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 ADGRG4Q8IZF6 3080 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 LOC100130705A0A1B0GUX0 176 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 A8MV72 311 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 IQCF6A8MYZ5 107 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 FAM157AC9JC47 383 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 CLDN25C9JDP6 229 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 ZNF670-ZNF695F2Z2N8 137 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 H3BSA7 217 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 XRCC2O43543 280 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 RP2O75695 350 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 CYB5R3P00387 301 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 PNPP00491 289 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 APOC1P02654 83 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 CD55P08174 381 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 ADH4P08319 380 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 TACSTD2P09758 323 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 OTX1P32242 354 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 ADMP35318 185 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 PMELP40967 661 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 SRP9P49458 86 aaKnown RBP4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 GZMKP49863 264 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 FAM3AP98173 230 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 HOXA4Q00056 320 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 GABPB1Q06547 395 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 RCN1Q15293 331 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 MPPED2Q15777 294 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 ODF4Q2M2E3 257 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 DMRTC1Q5HYR2 192 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 FAM209AQ5JX71 171 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 FAM201AQ5SY85 155 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 ZNF322Q6U7Q0 402 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 IL17RELQ6ZVW7 336 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 RHOUQ7L0Q8 258 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 SSX6Q7RTT6 188 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 PRSS45Q7RTY3 260 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 MOGAT3Q86VF5 341 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 COMMD2Q86X83 199 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 GID4Q8IVV7 300 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 YIPF7Q8N8F6 280 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 ZNF555Q8NEP9 628 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 OR10H4Q8NGA5 316 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 OR8B12Q8NGG6 310 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 TIMD4Q96H15 378 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 HRASLS5Q96KN8 279 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 OR8B4Q96RC9 309 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 SLC30A2Q9BRI3 323 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 OR10A2Q9H208 303 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 SP140LQ9H930 580 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 GCM1Q9NP62 436 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 AMBNQ9NP70 447 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 TMEM106BQ9NUM4 274 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 FAM118AQ9NWS6 357 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 CLN6Q9NWW5 311 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 CGGBP1Q9UFW8 167 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 WARS2Q9UGM6 360 aaKnown RBP4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 PCDHB10Q9UN67 800 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 WIPI2Q9Y4P8 454 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 TMEM14AQ9Y6G1 99 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 PLCE1Q9P212 2302 aa4.87□□□□□ -1.63
HMGB3P24-201ENST00000433260 TEX15Q9BXT5 2789 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 A0A1W2PQL4 384 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 DAPL1A0PJW8 107 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 A6NIN4 97 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 ANKRD30BLA7E2S9 258 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 ZNF850A8MQ14 1090 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 P2RY10O00398 339 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 PHYHO14832 338 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 GMDSO60547 372 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 LMX1BO60663 402 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 CLIC3O95833 236 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 KRT8P05787 483 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 OR2T7P0C7T2 308 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 HTR1FP30939 366 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 GNALP38405 381 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 PSMB10P40306 273 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 RIDAP52758 137 aaKnown RBP4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 CDH15P55291 814 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 LMO4P61968 165 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 ELF3P78545 371 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 MRPS11P82912 194 aaKnown RBP4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 IL5RAQ01344 420 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 MFGE8Q08431 387 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 C4orf46Q504U0 113 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 TP53I3Q53FA7 332 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 C6orf52Q5T4I8 152 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 MEDAGQ5VYS4 303 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 SFRP4Q6FHJ7 346 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 FAM166AQ6J272 317 aa4.86□□□□□ -1.63
HMGB3P24-201ENST00000433260 FAHD2BQ6P2I3 314 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms