RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 DIRC2Q96SL1 478 aa12.24□□□□□ -0.45
CSTF3-202ENST00000431742 SOX7Q9BT81 388 aa12.24□□□□□ -0.45
CSTF3-202ENST00000431742 DUSP21Q9H596 190 aa12.24□□□□□ -0.45
CSTF3-202ENST00000431742 GPR84Q9NQS5 396 aa12.24□□□□□ -0.45
CSTF3-202ENST00000431742 MRPL15Q9P015 296 aaKnown RBP12.24□□□□□ -0.45
CSTF3-202ENST00000431742 CLEC2DQ9UHP7 191 aa12.24□□□□□ -0.45
CSTF3-202ENST00000431742 ZDHHC8Q9ULC8 765 aa12.24□□□□□ -0.45
CSTF3-202ENST00000431742 SLC22A13Q9Y226 551 aa12.24□□□□□ -0.45
CSTF3-202ENST00000431742 CAB39Q9Y376 341 aaPredicted RBP12.24□□□□□ -0.45
CSTF3-202ENST00000431742 CELSR1Q9NYQ6 3014 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 MLNRO43193 412 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 LY6HO94772 140 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 HPXP02790 462 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 CDK1P06493 297 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 ERCC1P07992 297 aaPredicted RBP12.23□□□□□ -0.45
CSTF3-202ENST00000431742 CCL1P22362 96 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 ACKR3P25106 362 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 C21orf33P30042 268 aaPredicted RBP12.23□□□□□ -0.45
CSTF3-202ENST00000431742 CCR9P51686 369 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 MRPL28Q13084 256 aaKnown RBP12.23□□□□□ -0.45
CSTF3-202ENST00000431742 Q5PR19 223 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 RNLSQ5VYX0 342 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 KRT74Q7RTS7 529 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 KLHL36Q8N4N3 616 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 OR13G1Q8NGZ3 307 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 OR52N1Q8NH53 320 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 OR51E1Q8TCB6 317 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 RPS4Y2Q8TD47 263 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 HAVCR2Q8TDQ0 301 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 SPRYD4Q8WW59 207 aaPredicted RBP12.23□□□□□ -0.45
CSTF3-202ENST00000431742 SGCDQ92629 289 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 SCN3BQ9NY72 215 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 GTF2A1LQ9UNN4 478 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 TPRKBQ9Y3C4 175 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 CR1P17927 2039 aa12.23□□□□□ -0.45
CSTF3-202ENST00000431742 ZNF469Q96JG9 3925 aaPredicted RBP12.23□□□□□ -0.45
CSTF3-202ENST00000431742 OR4C45A6NMZ5 311 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 E9PI62 339 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 SPRY3O43610 288 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 HTR1AP08908 422 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 ATP6V1B1P15313 513 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 TGM4P49221 684 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 MED21Q13503 144 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 SPRNQ5BIV9 151 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 RBM48Q5RL73 367 aaKnown RBP12.22□□□□□ -0.45
CSTF3-202ENST00000431742 OR2G6Q5TZ20 316 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 SHEQ5VZ18 495 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 TMPRSS11AQ6ZMR5 421 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 STX19Q8N4C7 294 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 CSNK2A3Q8NEV1 391 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 ELMOD3Q96FG2 381 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 CDCA4Q9BXL8 241 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 TMEM100Q9NV29 134 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 FRRS1LQ9P0K9 344 aa12.22□□□□□ -0.45
CSTF3-202ENST00000431742 DHRS7CA6NNS2 312 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 PTGES3LE9PB15 166 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 H0YL77 283 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 P2RY10O00398 339 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 SSX4O60224 188 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 DHRS3O75911 302 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 LALBAP00709 142 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 ISG15P05161 165 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 UBCP0CG48 685 aaKnown RBP12.21□□□□□ -0.45
CSTF3-202ENST00000431742 CA6P23280 308 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 CCL8P80075 99 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 MRPS11P82912 194 aaKnown RBP12.21□□□□□ -0.45
CSTF3-202ENST00000431742 ALKBH1Q13686 389 aaKnown RBP12.21□□□□□ -0.45
CSTF3-202ENST00000431742 DOC2BQ14184 412 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 IRF3Q14653 427 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 TSTQ16762 297 aaKnown RBP12.21□□□□□ -0.45
CSTF3-202ENST00000431742 ZBTB37Q5TC79 503 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 ZNF786Q8N393 782 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 ZNF525Q8N782 197 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 OR2Z1Q8NG97 314 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 OR10AD1Q8NGE0 317 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 MYDGFQ969H8 173 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 FAM71F1Q96KD3 344 aaPredicted RBP12.21□□□□□ -0.45
CSTF3-202ENST00000431742 SLC22A4Q9H015 551 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 MYOZ1Q9NP98 299 aaPredicted RBP12.21□□□□□ -0.45
CSTF3-202ENST00000431742 CHCHD3Q9NX63 227 aaKnown RBP12.21□□□□□ -0.45
CSTF3-202ENST00000431742 ITGB1BP2Q9UKP3 347 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 V9GYS6 101 aa12.21□□□□□ -0.45
CSTF3-202ENST00000431742 YLPM1P49750 1951 aaKnown RBP12.2□□□□□ -0.46
CSTF3-202ENST00000431742 LOC107986453A0A1B0GWG9 222 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 RP2O75695 350 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 CST4P01036 141 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 HLA-DPB1P04440 258 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 DAOP14920 347 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 MAP2K3P46734 347 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 GBX2P52951 348 aaPredicted RBP12.2□□□□□ -0.46
CSTF3-202ENST00000431742 TNFAIP6P98066 277 aaPredicted RBP12.2□□□□□ -0.46
CSTF3-202ENST00000431742 CCDC58Q4VC31 144 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 XAF1Q6GPH4 301 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 DOK3Q7L591 496 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 COMMD2Q86X83 199 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 KLBQ86Z14 1044 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 FTMTQ8N4E7 242 aa12.2□□□□□ -0.46
CSTF3-202ENST00000431742 NANOGP1Q8N7R0 232 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms