RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 OR5M10Q6IEU7 315 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 FAM71F2Q6NXP2 309 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 TTC33Q6PID6 262 aaPredicted RBP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 WDR74Q6RFH5 385 aaPredicted RBP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 METAP1DQ6UB28 335 aaPredicted RBP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF841Q6ZN19 808 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 C16orf62Q7Z3J2 963 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 COMMD7Q86VX2 200 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 KCNMB4Q86W47 210 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 RAB43Q86YS6 212 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 GID4Q8IVV7 300 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 STX19Q8N4C7 294 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 C15orf54Q8N8G6 183 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 OR10A7Q8NGE5 316 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 OR9A1PQ8NGU1 263 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 NDNFQ8TB73 568 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 SFT2D1Q8WV19 159 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 DEDD2Q8WXF8 326 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 NDRG1Q92597 394 aaKnown RBP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 TAF15Q92804 592 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 NABP1Q96AH0 204 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 HYLS1Q96M11 299 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 KLF6Q99612 283 aaPredicted RBP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 TMEM43Q9BTV4 400 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 PDCD10Q9BUL8 212 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 TSSK1BQ9BXA7 367 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 UCK2Q9BZX2 261 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 NMUR2Q9GZQ4 415 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 BLZF1Q9H2G9 400 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 DSN1Q9H410 356 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 METTL8Q9H825 291 aaKnown RBP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 MEAF6Q9HAF1 191 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 POPDC2Q9HBU9 364 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 SLCO1B3Q9NPD5 702 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 IL26Q9NPH9 171 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 PLSCR3Q9NRY6 295 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 IMP3Q9NV31 184 aaKnown RBP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 ASF1BQ9NVP2 202 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 CD274Q9NZQ7 290 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 COPZ2Q9P299 210 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 MYEF2Q9P2K5 600 aaKnown RBP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 DCDC2Q9UHG0 476 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 MGAT4AQ9UM21 535 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 TRAPPC4Q9Y296 219 aa3.33□□□□□ -1.88
HMGB3-203ENST00000430118 MRPS18BQ9Y676 258 aaKnown RBP3.33□□□□□ -1.88
HMGB3-203ENST00000430118 SDK2Q58EX2 2172 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 MED13Q9UHV7 2174 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 IGHV1OR21-1A0A087WYE8 117 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 A0A0G2JND7 137 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 CCDC182A6NF36 153 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 A8MXK9 166 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 M0QYV0 167 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 OR7A17O14581 309 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF208O43345 1280 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 BANF1O75531 89 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 PIAS1O75925 651 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 OR2B3O76000 313 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 FTH1P02794 183 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ANXA5P08758 320 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TRIM49P0CI25 452 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TRIM49CP0CI26 452 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 SLC2A1P11166 492 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 HTR1EP28566 365 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 CD1CP29017 333 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 OR1E1P30953 314 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 CAPGP40121 348 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 RGS6P49758 472 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 EIF3EP60228 445 aaKnown RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 MRPS22P82650 360 aaKnown RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 FKBP3Q00688 224 aaKnown RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 BDH1Q02338 343 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 GK3PQ14409 553 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF235Q14590 738 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TMEM187Q14656 261 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF146Q15072 292 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 RAB35Q15286 201 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 IRF4Q15306 451 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TOMM34Q15785 309 aaPredicted RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF630Q2M218 657 aaPredicted RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TMEM30BQ3MIR4 351 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 CARD16Q5EG05 197 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 RBM48Q5RL73 367 aaKnown RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TPRG1LQ5T0D9 272 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 SLC25A25Q6KCM7 469 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 SCYL2Q6P3W7 929 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 TEX261Q6UWH6 196 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 GDPGP1Q6ZNW5 385 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 FAM92BQ6ZTR7 304 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 NOTCH2NLQ7Z3S9 236 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 HSD11B1LQ7Z5J1 315 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 SNX20Q7Z614 316 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 SLC13A5Q86YT5 568 aaPredicted RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 SKA3Q8IX90 412 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 MCOLN2Q8IZK6 566 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 C8orf59Q8N0T1 100 aaPredicted RBP3.32□□□□□ -1.88
HMGB3-203ENST00000430118 SVOPLQ8N434 492 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ZADH2Q8N4Q0 377 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF614Q8N883 585 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 GDPD1Q8N9F7 314 aa3.32□□□□□ -1.88
HMGB3-203ENST00000430118 OR5T1Q8NG75 326 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms